EnhancerDB
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  3. rs149540236[chr6:42738603]
Enhancers that have rs149540236[chr6:42738603]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 42728265 42744755 enh9126
Prostate (PC-3) Large Intestine Prostate (RWPE1) Blood (T-cell) Astrocyte Blood (OCI-LY7) Blood (GM12878) Colon (HCT116) Peripheral Blood (MM.1S) Blood (Karpas-422) Lung (PC-9) Pancreas Thymus
chr6 42738530 42739530 vista51993
VISTA
Transcript factors that have rs149540236[chr6:42738603]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 42738565 42739194 POLR2A UCSC Txn Factor no Conserved 108540283
chr6 42738597 42738612 MEF2A JASPAR yes 70365931
chr6 42738597 42738612 MEF2A JASPAR yes 101740280
chr6 42738598 42738613 MEF2C JASPAR yes 70365932
chr6 42738598 42738613 MEF2C JASPAR yes 101740281
chr6 42738599 42738611 MEF2A JASPAR yes 70365933
chr6 42738599 42738611 MEF2B JASPAR yes 70365934
chr6 42738599 42738611 MEF2D JASPAR yes 70365935
chr6 42738599 42738611 MEF2A JASPAR yes 101740282
chr6 42738599 42738611 MEF2B JASPAR yes 101740283
chr6 42738599 42738611 MEF2D JASPAR yes 101740284
chr6 42738601 42738605 YY1 TRANSFAC yes 70365936
chr6 42738601 42738605 YY1 TRANSFAC yes 101740285
Genes associated with rs149540236[chr6:42738603], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More