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- rs149860985[chr16:88021230]
Enhancers that have rs149860985[chr16:88021230]
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| Chrom. |
Start |
End |
Enhancer ID |
Tissues that enhancer appears |
More |
| chr16 |
88018113 |
88022526 |
enh32026 |
|
|
Transcript factors that have rs149860985[chr16:88021230]
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| Chrom. |
Start |
End |
TF name |
Source |
Predicted site? |
Tissue |
id |
More |
|
chr16
|
88019383
|
88021644
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
108221769
|
|
|
chr16
|
88019661
|
88021864
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
108221771
|
|
|
chr16
|
88020129
|
88021865
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
108221773
|
|
|
chr16
|
88021228
|
88021236
|
TBX15
|
JASPAR
|
yes
|
|
12255424
|
|
|
chr16
|
88021228
|
88021239
|
E2F6
|
JASPAR
|
yes
|
|
12255425
|
|
|
chr16
|
88021229
|
88021234
|
SP1
|
TRANSFAC
|
yes
|
|
12255426
|
|
Genes associated with rs149860985[chr16:88021230], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
| Chrom. |
Start |
End |
Strand |
Gene name |
Ensembl ID |
TSS of gene |
Distance between TSS and SNP |
Tissue |
q Value |
id |
More |
|
chr16
|
87727144
|
87729753
|
-
|
AC010536.1
|
ENSG00000226180.2
|
87729753
|
291477
|
Pancreas
|
0.00504503
|
15147
|
|