EnhancerDB
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  3. rs149990816[chr1:116827952]
Enhancers that have rs149990816[chr1:116827952]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 116827040 116837335 enh579
Prostate (PC-3) Brain (SK-N-MC) Prostate (RWPE1) Lung (PC-9) Esophagus Blood (GM12878) Placenta Thyroid Peripheral Blood (MM.1S) Blood (Karpas-422) Muscle (Myoblast) Pancreas Spleen Muscle (Myotube) Epithelial (MCF-7)
Transcript factors that have rs149990816[chr1:116827952]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 116824595 116828518 ZNF274 GTRD no Blood (GM12878) 21331801
chr1 116825074 116828462 ZNF274 GTRD no Blood (GM12878) 21331802
chr1 116825353 116828529 ZNF274 GTRD no Blood (GM12878) 21331803
chr1 116825460 116828331 ZNF274 GTRD no Blood (GM12878) 21331804
chr1 116825818 116828623 ZNF274 GTRD no Blood (GM12878) 21331805
chr1 116826125 116828450 ZNF274 GTRD no Blood (GM12878) 21331807
chr1 116826220 116828573 ZNF274 GTRD no Blood (GM12878) 21331808
chr1 116826427 116828215 ZNF274 GTRD no Blood (GM12878) 21331810
chr1 116826659 116828126 ZNF274 GTRD no Blood (GM12878) 21331811
chr1 116826665 116828153 ZNF274 GTRD no Blood (GM12878) 21331812
chr1 116826675 116828032 ZNF274 GTRD no Blood (GM12878) 21331813
chr1 116826775 116828143 ZNF274 GTRD no Blood (GM12878) 21331818
chr1 116826810 116827986 ZNF274 GTRD no Blood (GM12878) 21331820
chr1 116826903 116827981 ZNF274 GTRD no Blood (GM12878) 21331822
chr1 116826980 116827988 ZNF274 GTRD no Blood (GM12878) 21331828
chr1 116827097 116828247 ZNF274 GTRD no Blood (GM12878) 21331839
chr1 116827946 116827952 GATA3 JASPAR yes 31789468
chr1 116827952 116827967 LEF1 JASPAR yes 31789469
Genes associated with rs149990816[chr1:116827952], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More