-
Home
- SNP
- rs150501838[chr16:19998540]
Enhancers that have rs150501838[chr16:19998540]
Back to top
| Chrom. |
Start |
End |
Enhancer ID |
Tissues that enhancer appears |
More |
| chr16 |
19997445 |
20001595 |
enh96666 |
|
|
Transcript factors that have rs150501838[chr16:19998540]
Back to top
| Chrom. |
Start |
End |
TF name |
Source |
Predicted site? |
Tissue |
id |
More |
|
chr16
|
19997137
|
19998545
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
21695686
|
|
|
chr16
|
19998157
|
19998751
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
21695710
|
|
|
chr16
|
19998320
|
19998709
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
21695711
|
|
|
chr16
|
19998530
|
19998551
|
IRF1
|
JASPAR
|
yes
|
|
9892403
|
|
|
chr16
|
19998534
|
19998546
|
IRF1
|
JASPAR
|
yes
|
|
9892404
|
|
|
chr16
|
19998534
|
19998548
|
IRF7
|
JASPAR
|
yes
|
|
9892405
|
|
|
chr16
|
19998534
|
19998552
|
IRF2
|
JASPAR
|
yes
|
|
9892406
|
|
|
chr16
|
19998535
|
19998556
|
IRF1
|
JASPAR
|
yes
|
|
9892407
|
|
|
chr16
|
19998539
|
19998551
|
IRF1
|
JASPAR
|
yes
|
|
9892408
|
|
Genes associated with rs150501838[chr16:19998540], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
| Chrom. |
Start |
End |
Strand |
Gene name |
Ensembl ID |
TSS of gene |
Distance between TSS and SNP |
Tissue |
q Value |
id |
More |