EnhancerDB
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  3. rs150852420[chr6:108884180]
Enhancers that have rs150852420[chr6:108884180]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 108877863 108893955 enh9307
Liver (HepG2) Cervix (HeLa-S3) Large Intestine Blood (T-cell) Astrocyte Bone (Osteoblast) Blood (GM12878) Placenta Colon (HCT116) Peripheral Blood (MM.1S) Blood (Karpas-422) Muscle (Myoblast) Pancreas Pancreas (Panc1) Thymus Heart
chr6 108883670 108884545 vista53040
VISTA
Transcript factors that have rs150852420[chr6:108884180]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 108883454 108884410 POLR2A UCSC Txn Factor no Conserved 108541221
chr6 108883770 108884243 MYC UCSC Txn Factor no Conserved 108541223
chr6 108883817 108884290 GATA1 UCSC Txn Factor no Conserved 108541225
chr6 108884171 108884180 THAP1 JASPAR yes 70413653
chr6 108884171 108884180 THAP1 JASPAR yes 104177537
chr6 108884172 108884188 SRF JASPAR yes 70413654
chr6 108884172 108884188 SRF JASPAR yes 104177538
chr6 108884173 108884185 SRF JASPAR yes 70413655
chr6 108884173 108884185 SRF JASPAR yes 104177539
chr6 108884178 108884182 YY1 TRANSFAC yes 70413656
chr6 108884178 108884182 YY1 TRANSFAC yes 104177540
Genes associated with rs150852420[chr6:108884180], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More