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- rs151301[chr16:28497059]
Enhancers that have rs151301[chr16:28497059]
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| Chrom. |
Start |
End |
Enhancer ID |
Tissues that enhancer appears |
More |
| chr16 |
28496890 |
28497119 |
vista22304 |
|
|
Transcript factors that have rs151301[chr16:28497059]
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| Chrom. |
Start |
End |
TF name |
Source |
Predicted site? |
Tissue |
id |
More |
|
chr16
|
28494063
|
28497485
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
108190941
|
|
|
chr16
|
28494084
|
28498959
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
108190942
|
|
|
chr16
|
28494704
|
28497234
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
108190943
|
|
|
chr16
|
28494898
|
28498542
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
108190944
|
|
|
chr16
|
28495083
|
28497604
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
108190946
|
|
Genes associated with rs151301[chr16:28497059], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
| Chrom. |
Start |
End |
Strand |
Gene name |
Ensembl ID |
TSS of gene |
Distance between TSS and SNP |
Tissue |
q Value |
id |
More |
|
chr16
|
28477983
|
28506896
|
-
|
CLN3
|
ENSG00000188603.12
|
28506896
|
0
|
Esophagus
|
0.10186
|
14679
|
|