EnhancerDB
  1. Home
  2. SNP
  3. rs1533418[chr16:27190945]
Enhancers that have rs1533418[chr16:27190945]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 27178861 27194637 enh31749
Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-SH) Prostate (RWPE1) Blood (T-cell) Astrocyte Blood (OCI-LY7) Colon (HCT116) Peripheral Blood (MM.1S) Muscle (Myoblast) Spleen Muscle (Myotube) Thymus Epithelial (MCF-7)
Transcript factors that have rs1533418[chr16:27190945]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 27190280 27191062 TCF7L2 GTRD no Colon (HCT116) 21700526
chr16 27190671 27191321 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21700527
chr16 27190865 27191125 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21700528
chr16 27190884 27191114 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21700529
chr16 27190886 27191079 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 21700530
chr16 27190903 27191083 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21700531
chr16 27190912 27191101 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21700532
chr16 27190943 27190953 HOXA13 JASPAR yes 10175464
chr16 27190943 27190953 HOXB13 JASPAR yes 10175465
chr16 27190943 27190953 HOXC10 JASPAR yes 10175466
chr16 27190943 27190953 HOXD11 JASPAR yes 10175467
chr16 27190943 27190953 HOXD13 JASPAR yes 10175468
chr16 27190943 27190954 HOXC11 JASPAR yes 10175469
chr16 27190943 27190954 HOXC13 JASPAR yes 10175470
chr16 27190944 27190953 CDX1 JASPAR yes 10175471
chr16 27190944 27190955 CDX2 JASPAR yes 10175472
chr16 27190944 27190959 JUND JASPAR yes 10175473
Genes associated with rs1533418[chr16:27190945], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More