EnhancerDB
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  3. rs1543576[chr10:25180004]
Enhancers that have rs1543576[chr10:25180004]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr10 25169345 25193458 enh13071
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Bone (Osteoblast) Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs1543576[chr10:25180004]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr10 25179995 25180010 HNF4A JASPAR yes 126101549
chr10 25180004 25180008 LFA1 TRANSFAC yes 126101550
Genes associated with rs1543576[chr10:25180004], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More