EnhancerDB
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Enhancers that have rs1552483[chr1:154324898]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 154322025 154329335 enh49982
Cervix (HeLa-S3) Large Intestine Epithelial (MCF-7)
Transcript factors that have rs1552483[chr1:154324898]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 154323992 154325853 ZNF143 GTRD no Epithelial (MCF-7) 21340214
chr1 154324010 154327014 ZNF143 GTRD no Epithelial (MCF-7) 21340215
chr1 154324070 154325284 ZNF274 GTRD no Cervix (HeLa-S3) 21340216
chr1 154324074 154325487 ZNF143 GTRD no Epithelial (MCF-7) 21340217
chr1 154324116 154327580 ZNF143 GTRD no Epithelial (MCF-7) 21340218
chr1 154324134 154325277 ZNF143 GTRD no Epithelial (MCF-7) 21340219
chr1 154324147 154325343 ZNF143 GTRD no Epithelial (MCF-7) 21340220
chr1 154324156 154325390 ZNF143 GTRD no Epithelial (MCF-7) 21340221
chr1 154324166 154325332 ZNF143 GTRD no Epithelial (MCF-7) 21340222
chr1 154324169 154326906 ZNF143 GTRD no Epithelial (MCF-7) 21340223
chr1 154324196 154325014 ZNF274 GTRD no Cervix (HeLa-S3) 21340225
chr1 154324323 154324992 ZNF274 GTRD no Cervix (HeLa-S3) 21340226
chr1 154324407 154325333 ZNF274 GTRD no Cervix (HeLa-S3) 21340227
chr1 154324435 154325199 ZNF143 GTRD no Epithelial (MCF-7) 21340228
chr1 154324441 154324948 ZNF143 GTRD no Epithelial (MCF-7) 21340229
chr1 154324463 154324968 ZNF274 GTRD no Cervix (HeLa-S3) 21340230
chr1 154324484 154325487 ZNF143 GTRD no Epithelial (MCF-7) 21340231
chr1 154324490 154325206 ZNF274 GTRD no Cervix (HeLa-S3) 21340232
chr1 154324495 154326762 ZNF143 GTRD no Epithelial (MCF-7) 21340233
chr1 154324563 154325003 ZNF143 GTRD no Epithelial (MCF-7) 21340234
chr1 154324589 154325453 ZNF143 GTRD no Epithelial (MCF-7) 21340235
chr1 154324590 154327050 ZNF143 GTRD no Epithelial (MCF-7) 21340236
chr1 154324889 154324903 ZIC1 JASPAR yes 32285723
chr1 154324889 154324904 ZIC3 JASPAR yes 32285724
chr1 154324889 154324904 ZIC4 JASPAR yes 32285725
Genes associated with rs1552483[chr1:154324898], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More