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- rs1572639[chr13:112867872]
Enhancers that have rs1572639[chr13:112867872]
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| Chrom. |
Start |
End |
Enhancer ID |
Tissues that enhancer appears |
More |
| chr13 |
112862765 |
112870775 |
enh88078 |
|
|
| chr13 |
112867754 |
112868133 |
vista17110 |
|
|
Transcript factors that have rs1572639[chr13:112867872]
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| Chrom. |
Start |
End |
TF name |
Source |
Predicted site? |
Tissue |
id |
More |
|
chr13
|
112867068
|
112867976
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
108090411
|
|
|
chr13
|
112867160
|
112867936
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
108090412
|
|
|
chr13
|
112867709
|
112868225
|
ZZZ3
|
ENCODE Uniform TFBS
|
no
|
Cervix (HeLa-S3)
|
108090414
|
|
|
chr13
|
112867747
|
112868217
|
ZNF217
|
ENCODE Uniform TFBS
|
no
|
Epithelial (MCF-7)
|
21605700
|
|
|
chr13
|
112867747
|
112868217
|
GATA3
|
UCSC Txn Factor
|
no
|
Conserved
|
108090415
|
|
|
chr13
|
112867747
|
112868217
|
ZNF217
|
ENCODE Uniform TFBS
|
no
|
Epithelial (MCF-7)
|
108090416
|
|
|
chr13
|
112867758
|
112868120
|
ZNF217
|
ENCODE Uniform TFBS
|
no
|
Epithelial (MCF-7)
|
21605701
|
|
|
chr13
|
112867758
|
112868120
|
E2F1
|
UCSC Txn Factor
|
no
|
Conserved
|
108090417
|
|
|
chr13
|
112867758
|
112868120
|
ZNF217
|
ENCODE Uniform TFBS
|
no
|
Epithelial (MCF-7)
|
108090418
|
|
|
chr13
|
112867827
|
112868147
|
CTCF
|
UCSC Txn Factor
|
no
|
Conserved
|
108090419
|
|
|
chr13
|
112867857
|
112868147
|
ZBTB33
|
ENCODE Uniform TFBS
|
no
|
Colon (HCT116)
|
108090420
|
|
|
chr13
|
112867864
|
112868094
|
ZNF274
|
ENCODE Uniform TFBS
|
no
|
Liver (HepG2)
|
108090421
|
|
|
chr13
|
112867869
|
112868022
|
FOXA1
|
UCSC Txn Factor
|
no
|
Conserved
|
108090422
|
|
Genes associated with rs1572639[chr13:112867872], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
| Chrom. |
Start |
End |
Strand |
Gene name |
Ensembl ID |
TSS of gene |
Distance between TSS and SNP |
Tissue |
q Value |
id |
More |