EnhancerDB
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  3. rs1602267[chr1:218288023]
Enhancers that have rs1602267[chr1:218288023]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 218284325 218288475 enh50208
Large Intestine
Transcript factors that have rs1602267[chr1:218288023]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 218288008 218288029 MAFG JASPAR yes 35362539
chr1 218288014 218288024 ALX3 JASPAR yes 35362540
chr1 218288014 218288024 EMX1 JASPAR yes 35362541
chr1 218288014 218288024 EMX2 JASPAR yes 35362542
chr1 218288014 218288024 EN2 JASPAR yes 35362543
chr1 218288014 218288024 ESX1 JASPAR yes 35362544
chr1 218288014 218288024 EVX1 JASPAR yes 35362545
chr1 218288014 218288024 EVX2 JASPAR yes 35362546
chr1 218288014 218288024 GBX1 JASPAR yes 35362547
chr1 218288014 218288024 GBX2 JASPAR yes 35362548
chr1 218288014 218288024 GSX1 JASPAR yes 35362549
chr1 218288014 218288024 GSX2 JASPAR yes 35362550
chr1 218288014 218288024 HESX1 JASPAR yes 35362551
chr1 218288014 218288024 HOXA2 JASPAR yes 35362552
chr1 218288014 218288024 HOXB2 JASPAR yes 35362553
chr1 218288014 218288024 HOXB3 JASPAR yes 35362554
chr1 218288014 218288024 LBX2 JASPAR yes 35362555
chr1 218288014 218288024 LHX2 JASPAR yes 35362556
chr1 218288014 218288024 LHX6 JASPAR yes 35362557
chr1 218288014 218288024 MEOX1 JASPAR yes 35362558
chr1 218288014 218288024 MEOX2 JASPAR yes 35362559
chr1 218288014 218288024 MIXL1 JASPAR yes 35362560
chr1 218288014 218288024 MNX1 JASPAR yes 35362561
chr1 218288014 218288024 NOTO JASPAR yes 35362562
chr1 218288014 218288024 POU6F1 JASPAR yes 35362563
chr1 218288014 218288024 RAX JASPAR yes 35362564
chr1 218288015 218288023 BSX JASPAR yes 35362565
chr1 218288015 218288023 DLX6 JASPAR yes 35362566
chr1 218288015 218288023 EN1 JASPAR yes 35362567
chr1 218288015 218288023 ISX JASPAR yes 35362568
chr1 218288015 218288023 LBX1 JASPAR yes 35362569
chr1 218288015 218288023 LHX9 JASPAR yes 35362570
chr1 218288015 218288023 LMX1A JASPAR yes 35362571
chr1 218288015 218288023 LMX1B JASPAR yes 35362572
chr1 218288015 218288023 NKX6-1 JASPAR yes 35362573
chr1 218288015 218288023 NKX6-2 JASPAR yes 35362574
chr1 218288015 218288023 PAX4 JASPAR yes 35362575
chr1 218288015 218288023 PDX1 JASPAR yes 35362576
chr1 218288015 218288023 PRRX1 JASPAR yes 35362577
chr1 218288015 218288023 RAX2 JASPAR yes 35362578
chr1 218288015 218288023 SHOX JASPAR yes 35362579
chr1 218288015 218288023 UNCX JASPAR yes 35362580
chr1 218288015 218288023 VAX1 JASPAR yes 35362581
chr1 218288015 218288023 VAX2 JASPAR yes 35362582
chr1 218288015 218288023 VSX1 JASPAR yes 35362583
chr1 218288015 218288023 VSX2 JASPAR yes 35362584
chr1 218288015 218288025 POU6F2 JASPAR yes 35362585
chr1 218288015 218288029 POU1F1 JASPAR yes 35362586
chr1 218288016 218288028 POU3F1 JASPAR yes 35362587
chr1 218288016 218288028 POU3F2 JASPAR yes 35362588
chr1 218288016 218288029 POU3F3 JASPAR yes 35362589
chr1 218288017 218288029 POU2F1 JASPAR yes 35362590
chr1 218288018 218288027 POU3F4 JASPAR yes 35362591
chr1 218288018 218288027 POU5F1B JASPAR yes 35362592
chr1 218288023 218288027 YY1 TRANSFAC yes 35362593
Genes associated with rs1602267[chr1:218288023], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr1 217600334 217804424 - GPATCH2 ENSG00000092978.6 217804424 483599 Lung 0.0392902 1846