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- rs1638540[chr19:3555122]
Enhancers that have rs1638540[chr19:3555122]
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| Chrom. |
Start |
End |
Enhancer ID |
Tissues that enhancer appears |
More |
| chr19 |
3550863 |
3556635 |
enh4966 |
|
|
Transcript factors that have rs1638540[chr19:3555122]
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| Chrom. |
Start |
End |
TF name |
Source |
Predicted site? |
Tissue |
id |
More |
|
chr19
|
3553960
|
3555276
|
ZNF274
|
GTRD
|
no
|
Blood (GM12878)
|
108367821
|
|
|
chr19
|
3554038
|
3559185
|
ZNF274
|
GTRD
|
no
|
Cervix (HeLa-S3)
|
21839629
|
|
|
chr19
|
3554038
|
3559185
|
ZNF274
|
GTRD
|
no
|
Cervix (HeLa-S3)
|
108367822
|
|
|
chr19
|
3554051
|
3555406
|
ZNF274
|
GTRD
|
no
|
Blood (GM12878)
|
108367823
|
|
|
chr19
|
3554123
|
3555228
|
STAT3
|
GTRD
|
no
|
Blood (OCI-LY7)
|
21839630
|
|
|
chr19
|
3554123
|
3555228
|
STAT3
|
GTRD
|
no
|
Blood (OCI-LY7)
|
108367824
|
|
|
chr19
|
3554192
|
3555364
|
ZNF274
|
GTRD
|
no
|
Cervix (HeLa-S3)
|
108367825
|
|
|
chr19
|
3554768
|
3558480
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
21839631
|
|
|
chr19
|
3554768
|
3558480
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
108367826
|
|
|
chr19
|
3555104
|
3555124
|
RREB1
|
JASPAR
|
yes
|
|
112139061
|
|
|
chr19
|
3555107
|
3555127
|
RREB1
|
JASPAR
|
yes
|
|
112139062
|
|
|
chr19
|
3555109
|
3555129
|
RREB1
|
JASPAR
|
yes
|
|
112139063
|
|
|
chr19
|
3555114
|
3555129
|
FOXP1
|
JASPAR
|
yes
|
|
112139064
|
|
|
chr19
|
3555114
|
3555135
|
IRF1
|
JASPAR
|
yes
|
|
112139065
|
|
|
chr19
|
3555121
|
3555127
|
TCF4
|
TRANSFAC
|
yes
|
|
112139066
|
|
|
chr19
|
3555121
|
3555136
|
FOXP1
|
JASPAR
|
yes
|
|
112139067
|
|
|
chr19
|
3555122
|
3555133
|
FOXP2
|
JASPAR
|
yes
|
|
112139068
|
|
|
chr19
|
3555122
|
3555134
|
FOXC2
|
JASPAR
|
yes
|
|
112139069
|
|
Genes associated with rs1638540[chr19:3555122], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
| Chrom. |
Start |
End |
Strand |
Gene name |
Ensembl ID |
TSS of gene |
Distance between TSS and SNP |
Tissue |
q Value |
id |
More |