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- rs1638541[chr19:3556328]
Enhancers that have rs1638541[chr19:3556328]
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| Chrom. |
Start |
End |
Enhancer ID |
Tissues that enhancer appears |
More |
| chr19 |
3550863 |
3556635 |
enh4966 |
|
|
Transcript factors that have rs1638541[chr19:3556328]
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| Chrom. |
Start |
End |
TF name |
Source |
Predicted site? |
Tissue |
id |
More |
|
chr19
|
3554038
|
3559185
|
ZNF274
|
GTRD
|
no
|
Cervix (HeLa-S3)
|
21839629
|
|
|
chr19
|
3554038
|
3559185
|
ZNF274
|
GTRD
|
no
|
Cervix (HeLa-S3)
|
108367822
|
|
|
chr19
|
3554768
|
3558480
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
21839631
|
|
|
chr19
|
3554768
|
3558480
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
108367826
|
|
|
chr19
|
3555225
|
3558696
|
ZNF274
|
GTRD
|
no
|
Cervix (HeLa-S3)
|
21839632
|
|
|
chr19
|
3555225
|
3558696
|
ZNF274
|
GTRD
|
no
|
Cervix (HeLa-S3)
|
108367827
|
|
|
chr19
|
3555301
|
3556455
|
ZNF274
|
GTRD
|
no
|
Cervix (HeLa-S3)
|
108367829
|
|
|
chr19
|
3555316
|
3558525
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
21839633
|
|
|
chr19
|
3555316
|
3558525
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
108367830
|
|
|
chr19
|
3555319
|
3558510
|
ZNF274
|
GTRD
|
no
|
Cervix (HeLa-S3)
|
21839634
|
|
|
chr19
|
3555319
|
3558510
|
ZNF274
|
GTRD
|
no
|
Cervix (HeLa-S3)
|
108367831
|
|
|
chr19
|
3555391
|
3556766
|
ZNF274
|
GTRD
|
no
|
Cervix (HeLa-S3)
|
108367833
|
|
|
chr19
|
3555402
|
3558474
|
POLR2A
|
UCSC Txn Factor
|
no
|
Conserved
|
108367834
|
|
|
chr19
|
3556320
|
3556340
|
ESR1
|
JASPAR
|
yes
|
|
112139206
|
|
|
chr19
|
3556327
|
3556342
|
TFAP2A
|
JASPAR
|
yes
|
|
112139207
|
|
Genes associated with rs1638541[chr19:3556328], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
| Chrom. |
Start |
End |
Strand |
Gene name |
Ensembl ID |
TSS of gene |
Distance between TSS and SNP |
Tissue |
q Value |
id |
More |