EnhancerDB
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  3. rs1660419[chr1:108661636]
Enhancers that have rs1660419[chr1:108661636]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 108657985 108663498 enh43015
Brain (SK-N-SH) Prostate (RWPE1) Large Intestine Esophagus Lung (PC-9) Muscle (Myotube) Epithelial (MCF-7)
Transcript factors that have rs1660419[chr1:108661636]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 108660162 108662811 ZNF274 GTRD no Cervix (HeLa-S3) 107817949
chr1 108660235 108662513 ZNF143 GTRD no Epithelial (MCF-7) 21326419
chr1 108660235 108662513 ZNF143 GTRD no Epithelial (MCF-7) 107817950
chr1 108660807 108661970 ZBTB33 GTRD no Lung (A549) 107817952
chr1 108660812 108661907 ZNF274 GTRD no Blood (GM12878) 107817953
chr1 108660813 108662428 ZNF274 GTRD no Cervix (HeLa-S3) 107817954
chr1 108660816 108661899 ZNF143 GTRD no Epithelial (MCF-7) 21326421
chr1 108660816 108661899 ZNF143 GTRD no Epithelial (MCF-7) 107817955
chr1 108660819 108662597 ZNF274 GTRD no Blood (GM12878) 107817956
chr1 108660820 108661926 ZNF143 GTRD no Epithelial (MCF-7) 21326422
chr1 108660820 108661926 ZNF143 GTRD no Epithelial (MCF-7) 107817957
chr1 108660834 108662621 ZNF274 GTRD no Blood (GM12878) 107817958
chr1 108660836 108661759 ZNF274 GTRD no Blood (GM12878) 107817960
chr1 108660836 108661956 ZNF274 GTRD no Cervix (HeLa-S3) 107817961
chr1 108660839 108661833 ZNF143 GTRD no Epithelial (MCF-7) 21326423
chr1 108660839 108661833 ZNF143 GTRD no Epithelial (MCF-7) 107817962
chr1 108660841 108661674 ZNF274 GTRD no Blood (GM12878) 107817963
chr1 108660843 108662042 ZNF274 GTRD no Blood (GM12878) 107817964
chr1 108660843 108662350 ZNF274 GTRD no Blood (GM12878) 107817965
chr1 108660845 108662009 ZNF274 GTRD no Blood (GM12878) 107817966
chr1 108660847 108662178 ZNF274 GTRD no Blood (GM12878) 107817967
chr1 108660848 108661795 ZNF274 GTRD no Blood (GM12878) 107817968
chr1 108660849 108662255 ZNF274 GTRD no Cervix (HeLa-S3) 107817969
chr1 108660852 108661781 ZNF274 GTRD no Blood (GM12878) 107817970
chr1 108660854 108661745 ZNF274 GTRD no Blood (GM12878) 107817971
chr1 108660855 108661966 ZNF274 GTRD no Cervix (HeLa-S3) 107817972
chr1 108660857 108662141 ZNF274 GTRD no Cervix (HeLa-S3) 107817974
chr1 108660858 108661893 ZBTB33 GTRD no Lung (A549) 107817976
chr1 108660859 108661708 ZNF143 GTRD no Epithelial (MCF-7) 21326424
chr1 108660859 108661708 ZNF143 GTRD no Epithelial (MCF-7) 107817977
chr1 108660859 108661793 ZNF274 GTRD no Blood (GM12878) 107817978
chr1 108660859 108662035 ZNF274 GTRD no Blood (GM12878) 107817979
chr1 108660861 108662331 ZNF274 GTRD no Cervix (HeLa-S3) 107817980
chr1 108660861 108662541 ZNF143 GTRD no Epithelial (MCF-7) 21326425
chr1 108660861 108662541 ZNF143 GTRD no Epithelial (MCF-7) 107817981
chr1 108660862 108661842 ZNF274 GTRD no Cervix (HeLa-S3) 107817982
chr1 108660863 108661704 CTCF GTRD no Spleen 107817983
chr1 108660863 108662009 ZNF143 GTRD no Epithelial (MCF-7) 21326426
chr1 108660863 108662009 ZNF143 GTRD no Epithelial (MCF-7) 107817984
chr1 108660864 108661762 ZNF274 GTRD no Blood (GM12878) 107817985
chr1 108660868 108661804 ZNF274 GTRD no Blood (GM12878) 107817986
chr1 108660868 108661890 ZBTB33 GTRD no Lung (A549) 107817987
chr1 108660869 108661836 ZNF274 GTRD no Cervix (HeLa-S3) 107817988
chr1 108660869 108661901 ZNF143 GTRD no Epithelial (MCF-7) 21326427
chr1 108660869 108661901 ZNF143 GTRD no Epithelial (MCF-7) 107817989
chr1 108660872 108661908 ZNF274 GTRD no Cervix (HeLa-S3) 107817990
chr1 108660874 108661781 ZNF274 GTRD no Blood (GM12878) 107817991
chr1 108660874 108661864 ZNF274 GTRD no Blood (GM12878) 107817992
chr1 108660874 108661938 ZNF143 GTRD no Epithelial (MCF-7) 21326428
chr1 108660874 108661938 ZNF143 GTRD no Epithelial (MCF-7) 107817993
chr1 108660875 108661803 ZNF274 GTRD no Cervix (HeLa-S3) 107817994
chr1 108660876 108661805 ZNF143 GTRD no Epithelial (MCF-7) 21326429
chr1 108660876 108661805 ZNF143 GTRD no Epithelial (MCF-7) 107817995
chr1 108660878 108661755 ZBTB33 GTRD no Lung (A549) 107817997
chr1 108660879 108661681 ZNF143 GTRD no Epithelial (MCF-7) 21326430
chr1 108660879 108661681 ZNF143 GTRD no Epithelial (MCF-7) 107817998
chr1 108660879 108661788 ZNF143 GTRD no Epithelial (MCF-7) 21326431
chr1 108660879 108661788 ZNF143 GTRD no Epithelial (MCF-7) 107817999
chr1 108660885 108661853 ZNF274 GTRD no Blood (GM12878) 107818000
chr1 108660888 108661822 ZNF143 GTRD no Epithelial (MCF-7) 21326432
chr1 108660888 108661822 ZNF143 GTRD no Epithelial (MCF-7) 107818001
chr1 108660888 108661827 ZBTB33 GTRD no Lung (A549) 107818002
chr1 108660894 108661818 ZNF143 GTRD no Epithelial (MCF-7) 21326433
chr1 108660894 108661818 ZNF143 GTRD no Epithelial (MCF-7) 107818004
chr1 108660899 108661737 ZNF274 GTRD no Blood (GM12878) 107818005
chr1 108660901 108661669 ZNF274 GTRD no Cervix (HeLa-S3) 107818006
chr1 108660903 108661734 ZNF143 GTRD no Epithelial (MCF-7) 21326435
chr1 108660903 108661734 ZNF143 GTRD no Epithelial (MCF-7) 107818008
chr1 108660905 108661689 ZNF274 GTRD no Blood (GM12878) 107818009
chr1 108660906 108661818 ZNF143 GTRD no Epithelial (MCF-7) 21326436
chr1 108660906 108661818 ZNF143 GTRD no Epithelial (MCF-7) 107818011
chr1 108660907 108661815 ZNF143 GTRD no Epithelial (MCF-7) 21326437
chr1 108660907 108661815 ZNF143 GTRD no Epithelial (MCF-7) 107818013
chr1 108660911 108661815 ZBTB33 GTRD no Lung (A549) 107818016
chr1 108660919 108661659 ZNF274 GTRD no Blood (GM12878) 107818021
chr1 108660920 108662559 ZNF274 GTRD no Cervix (HeLa-S3) 107818022
chr1 108660923 108661863 ZNF274 GTRD no Blood (GM12878) 107818023
chr1 108660927 108661794 ZNF274 GTRD no Cervix (HeLa-S3) 107818024
chr1 108660928 108661815 ZNF274 GTRD no Blood (GM12878) 107818025
chr1 108660930 108661826 ZNF143 GTRD no Epithelial (MCF-7) 21326439
chr1 108660930 108661826 ZNF143 GTRD no Epithelial (MCF-7) 107818027
chr1 108660933 108661835 ZNF274 GTRD no Cervix (HeLa-S3) 107818029
chr1 108660934 108661771 ZNF143 GTRD no Epithelial (MCF-7) 21326440
chr1 108660934 108661771 ZNF143 GTRD no Epithelial (MCF-7) 107818030
chr1 108660934 108661876 ZNF274 GTRD no Blood (GM12878) 107818031
chr1 108660939 108661672 ZBTB33 GTRD no Lung (A549) 107818033
chr1 108660939 108661712 ZNF274 GTRD no Blood (GM12878) 107818034
chr1 108660943 108661675 ZNF274 GTRD no Blood (GM12878) 107818036
chr1 108660945 108661785 ZNF274 GTRD no Blood (GM12878) 107818038
chr1 108660949 108661666 ZNF274 GTRD no Blood (GM12878) 107818039
chr1 108660950 108661663 ZNF274 GTRD no Blood (GM12878) 107818040
chr1 108660952 108661648 ZNF143 GTRD no Epithelial (MCF-7) 21326441
chr1 108660952 108661648 ZNF143 GTRD no Epithelial (MCF-7) 107818041
chr1 108660958 108661732 ZBTB33 GTRD no Lung (A549) 107818042
chr1 108660961 108661685 ZNF274 GTRD no Blood (GM12878) 107818044
chr1 108660971 108661766 ZNF274 GTRD no Blood (GM12878) 107818045
chr1 108660973 108661792 ZNF143 GTRD no Epithelial (MCF-7) 21326443
chr1 108660973 108661792 ZNF143 GTRD no Epithelial (MCF-7) 107818046
chr1 108661027 108661758 TCF7L2 GTRD no Colon (HCT116) 107818052
chr1 108661061 108661945 ZBTB33 GTRD no Lung (A549) 107818055
chr1 108661091 108661656 MYOD GTRD no Muscle (Myoblast) 107818060
chr1 108661248 108661692 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 21326447
chr1 108661248 108661692 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 107818078
chr1 108661325 108661845 ZNF274 GTRD no Blood (GM12878) 107818079
chr1 108661633 108661639 HiNF-A TRANSFAC yes 31384954
Genes associated with rs1660419[chr1:108661636], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More