EnhancerDB
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  3. rs16842188[chr1:242002688]
Enhancers that have rs16842188[chr1:242002688]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 241996165 242005735 enh12831
Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-MC) Astrocyte Placenta Peripheral Blood (MM.1S) Lung (PC-9) Muscle (Myoblast)
Transcript factors that have rs16842188[chr1:242002688]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 242002682 242002692 GSX2 JASPAR yes 36630462
chr1 242002682 242002692 MNX1 JASPAR yes 36630463
chr1 242002683 242002691 BARX1 JASPAR yes 36630464
chr1 242002683 242002692 VENTX JASPAR yes 36630465
chr1 242002685 242002700 FOXP1 JASPAR yes 36630466
chr1 242002686 242002695 SRY JASPAR yes 36630467
chr1 242002686 242002697 FOXP2 JASPAR yes 36630468
chr1 242002686 242002698 FOXC2 JASPAR yes 36630469
chr1 242002687 242002698 FOXC1 JASPAR yes 36630470
chr1 242002688 242002696 FOXO3 JASPAR yes 36630471
chr1 242002688 242002699 FOXA1 JASPAR yes 36630472
Genes associated with rs16842188[chr1:242002688], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More