EnhancerDB
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  3. rs16854213[chr1:204677959]
Enhancers that have rs16854213[chr1:204677959]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 204671389 204688135 enh890
Bone Marrow (K562) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Blood (OCI-LY7) Placenta Peripheral Blood (MM.1S) Blood (Karpas-422) Lung (PC-9) Thymus Epithelial (MCF-7)
Transcript factors that have rs16854213[chr1:204677959]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 204677091 204679415 ZNF143 GTRD no Epithelial (MCF-7) 21370968
chr1 204677491 204678195 ZNF274 GTRD no Bone Marrow (K562) 21370969
chr1 204677519 204678167 ZNF143 GTRD no Epithelial (MCF-7) 21370970
chr1 204677537 204678112 ZNF143 GTRD no Epithelial (MCF-7) 21370971
chr1 204677548 204678078 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21370973
chr1 204677556 204678072 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21370974
chr1 204677673 204678131 ZNF274 GTRD no Bone Marrow (K562) 21370978
chr1 204677691 204678111 ZNF143 GTRD no Epithelial (MCF-7) 21370980
chr1 204677771 204678208 ZNF274 GTRD no Bone Marrow (K562) 21370981
chr1 204677782 204678606 ZNF274 GTRD no Bone Marrow (K562) 21370982
chr1 204677854 204679972 ZNF274 GTRD no Bone Marrow (K562) 21370983
chr1 204677874 204678329 ZNF274 GTRD no Bone Marrow (K562) 21370984
chr1 204677891 204678270 ZNF274 GTRD no Bone Marrow (K562) 21370985
chr1 204677957 204677967 ESX1 JASPAR yes 34722162
chr1 204677957 204677967 GBX1 JASPAR yes 34722163
chr1 204677957 204677967 GSX1 JASPAR yes 34722164
chr1 204677957 204677967 GSX2 JASPAR yes 34722165
chr1 204677958 204677966 BSX JASPAR yes 34722166
chr1 204677958 204677966 DLX6 JASPAR yes 34722167
chr1 204677958 204677966 MSX1 JASPAR yes 34722168
chr1 204677958 204677966 MSX2 JASPAR yes 34722169
Genes associated with rs16854213[chr1:204677959], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More