EnhancerDB
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  3. rs16966801[chr17:39573713]
Enhancers that have rs16966801[chr17:39573713]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 39567925 39576975 enh17149
Prostate (PC-3) Liver (HepG2) Astrocyte Bone (Osteoblast) Placenta Colon (HCT116) Lung (PC-9) Muscle (Myotube) Epithelial (MCF-7)
Transcript factors that have rs16966801[chr17:39573713]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 39572314 39574562 ZBTB33 GTRD no Lung (A549) 108258186
chr17 39572314 39574562 ZBTB33 GTRD no Lung (A549) 108258187
chr17 39572976 39574375 TCF7L2 GTRD no Colon (HCT116) 21757532
chr17 39573007 39574443 TCF7L2 GTRD no Colon (HCT116) 21757533
chr17 39573013 39574371 TCF7L2 GTRD no Colon (HCT116) 21757535
chr17 39573013 39574795 TCF7L2 GTRD no Colon (HCT116) 21757536
chr17 39573089 39574821 ZNF143 GTRD no Epithelial (MCF-7) 21757537
chr17 39573116 39574533 TCF7L2 GTRD no Colon (HCT116) 21757538
chr17 39573199 39574192 TCF7L2 GTRD no Colon (HCT116) 21757539
chr17 39573205 39574275 ZNF274 GTRD no Liver (HepG2) 21757540
chr17 39573289 39574003 TCF7L2 GTRD no Colon (HCT116) 21757541
chr17 39573300 39574483 TCF7L2 GTRD no Colon (HCT116) 21757542
chr17 39573332 39574406 ZNF274 GTRD no Liver (HepG2) 21757543
chr17 39573341 39574269 TCF7L2 GTRD no Colon (HCT116) 21757544
chr17 39573347 39573906 ZNF274 GTRD no Liver (HepG2) 21757545
chr17 39573354 39574354 ZNF143 GTRD no Epithelial (MCF-7) 21757546
chr17 39573362 39574380 TCF7L2 GTRD no Colon (HCT116) 21757547
chr17 39573368 39574275 ZNF143 GTRD no Epithelial (MCF-7) 21757548
chr17 39573368 39574444 ZNF274 GTRD no Liver (HepG2) 21757549
chr17 39573376 39574418 ZNF274 GTRD no Liver (HepG2) 21757550
chr17 39573384 39574237 TCF7L2 GTRD no Colon (HCT116) 21757551
chr17 39573384 39574459 ZNF143 GTRD no Epithelial (MCF-7) 21757552
chr17 39573393 39574421 ZNF143 GTRD no Epithelial (MCF-7) 21757553
chr17 39573414 39574422 ZNF274 GTRD no Liver (HepG2) 21757554
chr17 39573434 39573882 ZNF143 GTRD no Epithelial (MCF-7) 21757555
chr17 39573524 39574107 TCF7L2 GTRD no Colon (HCT116) 21757556
chr17 39573530 39574184 TCF7L2 GTRD no Colon (HCT116) 21757557
chr17 39573603 39574451 ZNF274 GTRD no Liver (HepG2) 21757558
chr17 39573616 39574114 ZNF143 GTRD no Epithelial (MCF-7) 21757559
chr17 39573623 39574492 ZNF143 GTRD no Epithelial (MCF-7) 21757560
chr17 39573629 39574147 ZNF274 GTRD no Liver (HepG2) 21757561
chr17 39573639 39574364 ZNF274 GTRD no Liver (HepG2) 21757562
chr17 39573649 39574470 ZNF274 GTRD no Liver (HepG2) 21757563
chr17 39573665 39574551 ZNF143 GTRD no Epithelial (MCF-7) 21757564
chr17 39573668 39574360 ZNF274 GTRD no Liver (HepG2) 21757565
chr17 39573704 39573719 HNF4G JASPAR yes 54260290
chr17 39573709 39573715 SOX10 JASPAR yes 54260291
chr17 39573711 39574034 ZNF274 GTRD no Liver (HepG2) 21757566
Genes associated with rs16966801[chr17:39573713], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr17 39642388 39648798 - KRT36 ENSG00000126337.9 39648798 68675 Esophagus 0.0226228 15828
chr17 38632080 38657849 - TNS4 ENSG00000131746.8 38657849 915864 Spleen 0.338561 15769