EnhancerDB
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  3. rs17550271[chr1:236103112]
Enhancers that have rs17550271[chr1:236103112]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 236091945 236120510 enh12806
Skin (Keratinocyte) Prostate (PC-3) Brain (SK-N-MC) Prostate (RWPE1) Blood (T-cell) Esophagus Astrocyte Lung (PC-9) Bone (Osteoblast) Blood (GM12878) Placenta Muscle (Myoblast) Breast Pancreas (Panc1) Muscle (Myotube) Uterus Thymus Stomach
Transcript factors that have rs17550271[chr1:236103112]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 236102960 236104328 ZNF274 GTRD no Blood (GM12878) 21404030
chr1 236102960 236104328 ZNF274 GTRD no Blood (GM12878) 107886295
chr1 236102996 236104338 ZNF274 GTRD no Bone Marrow (K562) 107886296
chr1 236103004 236104224 ZNF274 GTRD no Blood (GM12878) 21404031
chr1 236103004 236104224 ZNF274 GTRD no Blood (GM12878) 107886297
chr1 236103062 236104392 ZBTB33 GTRD no Lung (A549) 107886298
chr1 236103063 236104173 ZNF143 GTRD no Epithelial (MCF-7) 107886299
chr1 236103069 236103349 ZNF274 GTRD no Blood (GM12878) 21404032
chr1 236103098 236103113 ZIC3 JASPAR yes 36390588
chr1 236103098 236103113 ZIC4 JASPAR yes 36390589
chr1 236103099 236103113 ZIC1 JASPAR yes 36390590
chr1 236103099 236104402 ZNF143 GTRD no Epithelial (MCF-7) 107886300
Genes associated with rs17550271[chr1:236103112], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More