-
Home
- SNP
- rs17555669[chr1:109356394]
Enhancers that have rs17555669[chr1:109356394]
Back to top
| Chrom. |
Start |
End |
Enhancer ID |
Tissues that enhancer appears |
More |
| chr1 |
109354005 |
109358255 |
enh12119 |
|
|
Transcript factors that have rs17555669[chr1:109356394]
Back to top
| Chrom. |
Start |
End |
TF name |
Source |
Predicted site? |
Tissue |
id |
More |
|
chr1
|
109355890
|
109356460
|
ZNF217
|
ENCODE Uniform TFBS
|
no
|
Epithelial (MCF-7)
|
21326728
|
|
|
chr1
|
109356383
|
109356397
|
NR2F1
|
JASPAR
|
yes
|
|
31401961
|
|
|
chr1
|
109356383
|
109356397
|
RXRG
|
JASPAR
|
yes
|
|
31401962
|
|
|
chr1
|
109356383
|
109356398
|
NR2C2
|
JASPAR
|
yes
|
|
31401963
|
|
|
chr1
|
109356392
|
109356407
|
STAT1
|
JASPAR
|
yes
|
|
31401964
|
|
|
chr1
|
109356394
|
109356405
|
STAT1
|
JASPAR
|
yes
|
|
31401965
|
|
|
chr1
|
109356394
|
109356405
|
STAT3
|
JASPAR
|
yes
|
|
31401966
|
|
Genes associated with rs17555669[chr1:109356394], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
| Chrom. |
Start |
End |
Strand |
Gene name |
Ensembl ID |
TSS of gene |
Distance between TSS and SNP |
Tissue |
q Value |
id |
More |