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- rs17572883[chr2:219434985]
Enhancers that have rs17572883[chr2:219434985]
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| Chrom. |
Start |
End |
Enhancer ID |
Tissues that enhancer appears |
More |
| chr2 |
219434664 |
219435146 |
vista34781 |
|
|
Transcript factors that have rs17572883[chr2:219434985]
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| Chrom. |
Start |
End |
TF name |
Source |
Predicted site? |
Tissue |
id |
More |
|
chr2
|
219432680
|
219435106
|
POLR2A
|
UCSC Txn Factor
|
no
|
Conserved
|
108435215
|
|
|
chr2
|
219434890
|
219435166
|
JUND
|
UCSC Txn Factor
|
no
|
Conserved
|
108435216
|
|
|
chr2
|
219434973
|
219434991
|
NR3C1
|
JASPAR
|
yes
|
|
22211128
|
|
|
chr2
|
219434974
|
219434992
|
NR3C1
|
JASPAR
|
yes
|
|
22211129
|
|
|
chr2
|
219434984
|
219435000
|
SOX4
|
JASPAR
|
yes
|
|
22211130
|
|
Genes associated with rs17572883[chr2:219434985], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
| Chrom. |
Start |
End |
Strand |
Gene name |
Ensembl ID |
TSS of gene |
Distance between TSS and SNP |
Tissue |
q Value |
id |
More |
|
chr2
|
219124219
|
219128582
|
+
|
GPBAR1
|
ENSG00000179921.10
|
219124219
|
306403
|
Spleen
|
0.125356
|
3135
|
|