EnhancerDB
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Enhancers that have rs17711487[chr12:54220035]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 54212382 54224675 enh43743
Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-MC) Peripheral Blood (MM.1S) Lung (PC-9) Pancreas (Panc1) Muscle (Myotube) Epithelial (MCF-7)
Transcript factors that have rs17711487[chr12:54220035]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 54219764 54220895 ZNF143 GTRD no Epithelial (MCF-7) 21550025
chr12 54219766 54221126 ZNF274 GTRD no Cervix (HeLa-S3) 21550026
chr12 54219772 54220952 ZNF143 GTRD no Epithelial (MCF-7) 21550027
chr12 54219819 54221318 ZNF274 GTRD no Cervix (HeLa-S3) 21550028
chr12 54219924 54220729 ZNF143 GTRD no Epithelial (MCF-7) 21550029
chr12 54219933 54220750 ZNF143 GTRD no Epithelial (MCF-7) 21550030
chr12 54219940 54220998 ZNF143 GTRD no Epithelial (MCF-7) 21550031
chr12 54219941 54220726 ZNF143 GTRD no Epithelial (MCF-7) 21550032
chr12 54219948 54220778 ZNF143 GTRD no Epithelial (MCF-7) 21550033
chr12 54219948 54221018 ZNF143 GTRD no Epithelial (MCF-7) 21550034
chr12 54219949 54220544 ZNF274 GTRD no Cervix (HeLa-S3) 21550035
chr12 54220025 54221678 ZNF274 GTRD no Cervix (HeLa-S3) 21550036
chr12 54220026 54220041 SOX21 JASPAR yes 121011700
chr12 54220032 54220047 PRDM1 JASPAR yes 121011701
chr12 54220033 54220037 YY1 TRANSFAC yes 121011702
Genes associated with rs17711487[chr12:54220035], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More