EnhancerDB
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  3. rs181435939[chr6:42729189]
Enhancers that have rs181435939[chr6:42729189]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 42728265 42744755 enh9126
Prostate (PC-3) Large Intestine Prostate (RWPE1) Blood (T-cell) Astrocyte Blood (OCI-LY7) Blood (GM12878) Colon (HCT116) Peripheral Blood (MM.1S) Blood (Karpas-422) Lung (PC-9) Pancreas Thymus
Transcript factors that have rs181435939[chr6:42729189]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 42729178 42729189 HOXA10 JASPAR yes 101738780
chr6 42729179 42729189 HOXA13 JASPAR yes 101738782
chr6 42729179 42729189 HOXB13 JASPAR yes 101738783
chr6 42729179 42729189 HOXD13 JASPAR yes 101738784
chr6 42729179 42729191 MEF2D JASPAR yes 101738785
chr6 42729180 42729192 FOXI1 JASPAR yes 101738786
chr6 42729182 42729196 POU4F1 JASPAR yes 101738787
chr6 42729183 42729194 PHOX2A JASPAR yes 101738788
chr6 42729183 42729194 PROP1 JASPAR yes 101738789
chr6 42729185 42729199 POU4F1 JASPAR yes 101738790
chr6 42729186 42729199 DUXA JASPAR yes 101738791
chr6 42729187 42729198 DUX4 JASPAR yes 101738792
chr6 42729187 42729198 PHOX2A JASPAR yes 101738793
chr6 42729187 42729198 PROP1 JASPAR yes 101738794
chr6 42729187 42729203 POU4F2 JASPAR yes 101738795
chr6 42729187 42729203 POU4F3 JASPAR yes 101738796
chr6 42729188 42729198 PAX3 JASPAR yes 101738797
chr6 42729188 42729198 PAX7 JASPAR yes 101738798
chr6 42729189 42729203 POU4F1 JASPAR yes 101738799
chr6 42729189 42729204 HNF1A JASPAR yes 101738800
Genes associated with rs181435939[chr6:42729189], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More