EnhancerDB
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  3. rs182260520[chr13:113372834]
Enhancers that have rs182260520[chr13:113372834]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr13 113356925 113401095 enh15512
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs182260520[chr13:113372834]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr13 113372607 113373587 ZNF274 GTRD no Bone Marrow (K562) 21605720
chr13 113372607 113373587 ZNF274 GTRD no Bone Marrow (K562) 108090447
chr13 113372617 113373700 ZBTB33 GTRD no Lung (A549) 108090448
chr13 113372693 113373485 ZNF274 GTRD no Liver (HepG2) 21605721
chr13 113372693 113373485 ZNF274 GTRD no Liver (HepG2) 108090449
chr13 113372695 113374779 ZNF143 GTRD no Epithelial (MCF-7) 21605722
chr13 113372695 113374779 ZNF143 GTRD no Epithelial (MCF-7) 108090450
chr13 113372719 113373478 ZBTB33 GTRD no Lung (A549) 108090451
chr13 113372736 113373564 ZNF274 GTRD no Cervix (HeLa-S3) 21605723
chr13 113372736 113373564 ZNF274 GTRD no Cervix (HeLa-S3) 108090452
chr13 113372767 113373662 ZNF274 GTRD no Cervix (HeLa-S3) 21605724
chr13 113372767 113373662 ZNF274 GTRD no Cervix (HeLa-S3) 108090453
chr13 113372776 113373476 ZNF143 GTRD no Epithelial (MCF-7) 21605725
chr13 113372776 113373476 ZNF143 GTRD no Epithelial (MCF-7) 108090454
chr13 113372781 113373465 ZBTB33 GTRD no Lung (A549) 108090455
chr13 113372816 113374372 ZNF143 GTRD no Epithelial (MCF-7) 21605726
chr13 113372816 113374372 ZNF143 GTRD no Epithelial (MCF-7) 108090456
chr13 113372827 113373437 ZNF143 GTRD no Epithelial (MCF-7) 21605727
chr13 113372827 113373437 ZNF143 GTRD no Epithelial (MCF-7) 108090457
chr13 113372831 113372851 RREB1 JASPAR yes 60429658
chr13 113372834 113372842 TBX5 JASPAR yes 60429659
Genes associated with rs182260520[chr13:113372834], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More