EnhancerDB
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  3. rs185163228[chr1:236068252]
Enhancers that have rs185163228[chr1:236068252]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 236062005 236089295 enh12805
Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673)
Transcript factors that have rs185163228[chr1:236068252]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 236067840 236068418 ZBTB33 GTRD no Lung (A549) 21403824
chr1 236067860 236068303 ZBTB33 GTRD no Brain (SK-N-SH) 21403825
chr1 236068011 236068322 ZBTB33 GTRD no Lung (A549) 21403826
chr1 236068244 236068255 RUNX1 JASPAR yes 36386047
chr1 236068245 236068255 RUNX3 JASPAR yes 36386048
chr1 236068246 236068255 RUNX2 JASPAR yes 36386049
chr1 236068251 236068261 HOXA13 JASPAR yes 36386050
chr1 236068251 236068261 HOXB13 JASPAR yes 36386051
chr1 236068251 236068261 HOXD13 JASPAR yes 36386052
chr1 236068251 236068262 HOXC13 JASPAR yes 36386053
chr1 236068252 236068264 SRF JASPAR yes 36386054
Genes associated with rs185163228[chr1:236068252], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More