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- rs1859342[chr19:5478224]
Enhancers that have rs1859342[chr19:5478224]
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| Chrom. |
Start |
End |
Enhancer ID |
Tissues that enhancer appears |
More |
| chr19 |
5478179 |
5478421 |
vista28392 |
|
|
Transcript factors that have rs1859342[chr19:5478224]
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| Chrom. |
Start |
End |
TF name |
Source |
Predicted site? |
Tissue |
id |
More |
|
chr19
|
5477612
|
5478771
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
108375258
|
|
|
chr19
|
5477652
|
5478714
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
108375259
|
|
|
chr19
|
5477930
|
5478464
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
108375260
|
|
|
chr19
|
5478206
|
5478227
|
ZNF263
|
JASPAR
|
yes
|
|
70792414
|
|
|
chr19
|
5478212
|
5478226
|
PLAG1
|
JASPAR
|
yes
|
|
70792416
|
|
|
chr19
|
5478212
|
5478233
|
ZNF263
|
JASPAR
|
yes
|
|
70792417
|
|
|
chr19
|
5478213
|
5478227
|
PLAG1
|
JASPAR
|
yes
|
|
70792418
|
|
|
chr19
|
5478213
|
5478234
|
ZNF263
|
JASPAR
|
yes
|
|
70792419
|
|
|
chr19
|
5478218
|
5478768
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
108375261
|
|
|
chr19
|
5478221
|
5478231
|
SP1
|
JASPAR
|
yes
|
|
70792420
|
|
|
chr19
|
5478221
|
5478241
|
RREB1
|
JASPAR
|
yes
|
|
70792421
|
|
|
chr19
|
5478221
|
5478242
|
ZNF263
|
JASPAR
|
yes
|
|
70792422
|
|
|
chr19
|
5478223
|
5478229
|
MAZ
|
TRANSFAC
|
yes
|
|
70792423
|
|
Genes associated with rs1859342[chr19:5478224], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
| Chrom. |
Start |
End |
Strand |
Gene name |
Ensembl ID |
TSS of gene |
Distance between TSS and SNP |
Tissue |
q Value |
id |
More |
|
chr19
|
5680615
|
5688533
|
+
|
HSD11B1L
|
ENSG00000167733.9
|
5680615
|
202391
|
Esophagus
|
0.187534
|
16863
|
|