EnhancerDB
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  3. rs1860661[chr19:1650134]
Enhancers that have rs1860661[chr19:1650134]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 1646425 1650575 enh4953
Blood (Karpas-422)
Transcript factors that have rs1860661[chr19:1650134]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 1643773 1652434 ZNF274 GTRD no Blood (GM12878) 108354307
chr19 1645132 1652029 ZNF274 GTRD no Blood (GM12878) 108354308
chr19 1645966 1652354 ZNF274 GTRD no Blood (GM12878) 108354309
chr19 1646238 1651787 ZNF274 GTRD no Blood (GM12878) 108354310
chr19 1646263 1653739 ZNF274 GTRD no Blood (GM12878) 108354311
chr19 1646483 1652051 ZNF274 GTRD no Blood (GM12878) 108354312
chr19 1649427 1652183 ZNF274 GTRD no Bone Marrow (K562) 108354313
chr19 1649542 1651862 ZNF274 GTRD no Bone Marrow (K562) 108354314
chr19 1649576 1653718 ZNF274 GTRD no Bone Marrow (K562) 108354315
chr19 1649778 1653614 TCF7L2 GTRD no Colon (HCT116) 108354316
chr19 1649815 1654207 TCF7L2 GTRD no Colon (HCT116) 108354317
chr19 1649891 1655223 TCF7L2 GTRD no Colon (HCT116) 108354318
chr19 1649891 1655223 TCF7L2 GTRD no Colon (HCT116) 108354319
chr19 1649905 1653716 TCF7L2 GTRD no Colon (HCT116) 108354320
chr19 1649959 1651918 STAT3 GTRD no Blood (OCI-LY7) 108354321
chr19 1650062 1651726 ZNF274 GTRD no Blood (GM12878) 108354322
chr19 1650132 1650146 PLAG1 JASPAR yes 112020943
Genes associated with rs1860661[chr19:1650134], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More