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- rs1870209[chr12:52629679]
Enhancers that have rs1870209[chr12:52629679]
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| Chrom. |
Start |
End |
Enhancer ID |
Tissues that enhancer appears |
More |
| chr12 |
52629345 |
52635215 |
enh80195 |
|
|
Transcript factors that have rs1870209[chr12:52629679]
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| Chrom. |
Start |
End |
TF name |
Source |
Predicted site? |
Tissue |
id |
More |
|
chr12
|
52628398
|
52633205
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
108033822
|
|
|
chr12
|
52629113
|
52629769
|
ZBTB33
|
ENCODE Uniform TFBS
|
no
|
Lung (A549)
|
108033823
|
|
|
chr12
|
52629544
|
52633904
|
POLR2A
|
UCSC Txn Factor
|
no
|
Conserved
|
108033824
|
|
|
chr12
|
52629607
|
52630083
|
ZBTB33
|
ENCODE Uniform TFBS
|
no
|
Lung (A549)
|
108033825
|
|
|
chr12
|
52629672
|
52630242
|
ZNF217
|
ENCODE Uniform TFBS
|
no
|
Epithelial (MCF-7)
|
108033826
|
|
Genes associated with rs1870209[chr12:52629679], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
| Chrom. |
Start |
End |
Strand |
Gene name |
Ensembl ID |
TSS of gene |
Distance between TSS and SNP |
Tissue |
q Value |
id |
More |
|
chr12
|
52626304
|
52645970
|
+
|
KRT7
|
ENSG00000135480.10
|
52626304
|
0
|
Esophagus
|
1.37012e-11
|
12079
|
|