EnhancerDB
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Enhancers that have rs187401606[chr17:39572858]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 39567925 39576975 enh17149
Prostate (PC-3) Liver (HepG2) Astrocyte Bone (Osteoblast) Placenta Colon (HCT116) Lung (PC-9) Muscle (Myotube) Epithelial (MCF-7)
Transcript factors that have rs187401606[chr17:39572858]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 39572314 39574562 ZBTB33 GTRD no Lung (A549) 108258186
chr17 39572314 39574562 ZBTB33 GTRD no Lung (A549) 108258187
chr17 39572815 39573015 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21757530
chr17 39572824 39573104 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21757531
chr17 39572846 39572858 PBX1 JASPAR yes 54260161
chr17 39572857 39572871 ONECUT1 JASPAR yes 54260162
chr17 39572857 39572871 ONECUT2 JASPAR yes 54260163
chr17 39572857 39572871 ONECUT3 JASPAR yes 54260164
chr17 39572858 39572867 SOX9 JASPAR yes 54260165
chr17 39572858 39572868 CUX1 JASPAR yes 54260166
chr17 39572858 39572868 CUX2 JASPAR yes 54260167
Genes associated with rs187401606[chr17:39572858], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More