EnhancerDB
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  3. rs188040552[chr9:115259985]
Enhancers that have rs188040552[chr9:115259985]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr9 115253885 115262535 enh93833
Liver (HepG2) Epithelial (MCF-7)
Transcript factors that have rs188040552[chr9:115259985]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr9 115259975 115259988 DUXA JASPAR yes 86370825
chr9 115259976 115259987 DUX4 JASPAR yes 86370826
chr9 115259976 115259987 PHOX2A JASPAR yes 86370827
chr9 115259976 115259987 PROP1 JASPAR yes 86370828
chr9 115259979 115259989 ALX3 JASPAR yes 86370829
chr9 115259979 115259989 GSX1 JASPAR yes 86370830
chr9 115259979 115259989 GSX2 JASPAR yes 86370831
chr9 115259979 115259989 MIXL1 JASPAR yes 86370832
chr9 115259979 115259989 MNX1 JASPAR yes 86370833
chr9 115259979 115259989 NOTO JASPAR yes 86370834
chr9 115259980 115259988 ISX JASPAR yes 86370835
chr9 115259980 115259988 LMX1A JASPAR yes 86370836
chr9 115259980 115259988 LMX1B JASPAR yes 86370837
chr9 115259980 115259988 NKX6-1 JASPAR yes 86370838
chr9 115259980 115259988 NKX6-2 JASPAR yes 86370839
chr9 115259980 115259988 PRRX1 JASPAR yes 86370840
chr9 115259980 115259988 RAX2 JASPAR yes 86370841
chr9 115259980 115259988 SHOX JASPAR yes 86370842
chr9 115259980 115259988 UNCX JASPAR yes 86370843
chr9 115259980 115259988 VAX1 JASPAR yes 86370844
chr9 115259982 115259997 HNF1A JASPAR yes 86370845
Genes associated with rs188040552[chr9:115259985], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More