EnhancerDB
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  3. rs188067670[chr19:3555978]
Enhancers that have rs188067670[chr19:3555978]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 3550863 3556635 enh4966
Blood (OCI-LY7) Blood (T-cell) Thymus Blood (Karpas-422)
Transcript factors that have rs188067670[chr19:3555978]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 3554038 3559185 ZNF274 GTRD no Cervix (HeLa-S3) 21839629
chr19 3554038 3559185 ZNF274 GTRD no Cervix (HeLa-S3) 108367822
chr19 3554768 3558480 TCF7L2 GTRD no Colon (HCT116) 21839631
chr19 3554768 3558480 TCF7L2 GTRD no Colon (HCT116) 108367826
chr19 3555225 3558696 ZNF274 GTRD no Cervix (HeLa-S3) 21839632
chr19 3555225 3558696 ZNF274 GTRD no Cervix (HeLa-S3) 108367827
chr19 3555248 3556049 ZNF274 GTRD no Cervix (HeLa-S3) 108367828
chr19 3555301 3556455 ZNF274 GTRD no Cervix (HeLa-S3) 108367829
chr19 3555316 3558525 TCF7L2 GTRD no Colon (HCT116) 21839633
chr19 3555316 3558525 TCF7L2 GTRD no Colon (HCT116) 108367830
chr19 3555319 3558510 ZNF274 GTRD no Cervix (HeLa-S3) 21839634
chr19 3555319 3558510 ZNF274 GTRD no Cervix (HeLa-S3) 108367831
chr19 3555352 3556052 ZNF274 GTRD no Blood (GM12878) 108367832
chr19 3555391 3556766 ZNF274 GTRD no Cervix (HeLa-S3) 108367833
chr19 3555402 3558474 POLR2A UCSC Txn Factor no Conserved 108367834
chr19 3555968 3555980 JDP2 JASPAR yes 112139163
chr19 3555970 3555978 CREB1 JASPAR yes 112139164
Genes associated with rs188067670[chr19:3555978], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More