EnhancerDB
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  3. rs188153456[chr5:172730409]
Enhancers that have rs188153456[chr5:172730409]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 172714625 172733895 enh22820
Bone Marrow (K562) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-SH) Prostate (RWPE1) Astrocyte Bone (Osteoblast) Blood (GM12878) Muscle (A673) Placenta Colon (HCT116) Breast Embryonic Stem Cell Line (H1-hESC) Lung (PC-9) Pancreas Spleen Muscle (Myotube) Epithelial (MCF-7)
Transcript factors that have rs188153456[chr5:172730409]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 172730388 172730409 IRF1 JASPAR yes 67866046
chr5 172730397 172730411 ONECUT1 JASPAR yes 67866049
chr5 172730397 172730411 ONECUT2 JASPAR yes 67866050
chr5 172730397 172730411 ONECUT3 JASPAR yes 67866051
chr5 172730401 172730412 CDX2 JASPAR yes 67866052
chr5 172730403 172730413 HOXA13 JASPAR yes 67866056
chr5 172730403 172730413 HOXB13 JASPAR yes 67866057
chr5 172730403 172730413 HOXD13 JASPAR yes 67866058
chr5 172730409 172730424 FOXA1 JASPAR yes 67866059
Genes associated with rs188153456[chr5:172730409], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More