EnhancerDB
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Enhancers that have rs188352201[chr19:5624482]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
Transcript factors that have rs188352201[chr19:5624482]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 5619891 5626194 ZNF274 GTRD no Bone Marrow (K562) 108375544
chr19 5620947 5625533 ZNF274 GTRD no Bone Marrow (K562) 108375545
chr19 5620987 5626578 ZNF274 GTRD no Blood (GM12878) 108375546
chr19 5621030 5625414 ZNF274 GTRD no Blood (GM12878) 108375547
chr19 5621165 5625531 ZNF274 GTRD no Bone Marrow (K562) 108375549
chr19 5621285 5624549 ZNF274 GTRD no Bone Marrow (K562) 108375550
chr19 5621369 5624885 ZNF274 GTRD no Bone Marrow (K562) 108375553
chr19 5621387 5624577 ZNF274 GTRD no Bone Marrow (K562) 108375554
chr19 5621418 5624560 TCF7L2 GTRD no Colon (HCT116) 108375555
chr19 5621425 5624924 ZNF274 GTRD no Liver (HepG2) 108375557
chr19 5621431 5624678 ZNF274 GTRD no Blood (GM12878) 108375558
chr19 5621431 5624969 ZNF274 GTRD no Blood (GM12878) 108375559
chr19 5621438 5624687 TCF7L2 GTRD no Colon (HCT116) 108375560
chr19 5621501 5625259 ZNF274 GTRD no Blood (GM12878) 108375561
chr19 5621518 5624768 ZNF274 GTRD no Bone Marrow (K562) 108375562
chr19 5621579 5625063 ZNF274 GTRD no Bone Marrow (K562) 108375563
chr19 5621609 5624975 ZNF274 GTRD no Bone Marrow (K562) 108375564
chr19 5621666 5624658 ZNF274 GTRD no Cervix (HeLa-S3) 108375566
chr19 5621934 5625092 ZNF274 GTRD no Blood (GM12878) 108375570
chr19 5622048 5624594 ZNF274 GTRD no Bone Marrow (K562) 108375573
chr19 5622159 5625988 ZNF274 GTRD no Liver (HepG2) 108375575
chr19 5622492 5624522 ZNF274 GTRD no Liver (HepG2) 108375582
chr19 5623106 5624518 ZNF274 GTRD no Cervix (HeLa-S3) 108375584
chr19 5623440 5624639 ZNF274 GTRD no Blood (GM12878) 108375586
chr19 5623559 5625274 ZNF274 GTRD no Blood (GM12878) 108375588
chr19 5623725 5625317 ZNF274 GTRD no Bone Marrow (K562) 108375589
chr19 5623835 5625101 ZNF143 GTRD no Epithelial (MCF-7) 108375591
chr19 5623922 5624701 ZNF143 GTRD no Epithelial (MCF-7) 108375593
chr19 5623973 5625126 ZNF274 GTRD no Liver (HepG2) 108375594
chr19 5623993 5624604 ZBTB33 GTRD no Lung (A549) 108375595
chr19 5623993 5625022 ZNF274 GTRD no Liver (HepG2) 108375596
chr19 5624063 5624689 ZBTB33 GTRD no Lung (A549) 108375599
chr19 5624076 5625114 ZNF274 GTRD no Liver (HepG2) 108375602
chr19 5624077 5624623 ZNF143 GTRD no Epithelial (MCF-7) 108375603
chr19 5624082 5624482 ZNF274 GTRD no Liver (HepG2) 108375604
chr19 5624095 5624559 ZBTB33 GTRD no Brain (SK-N-SH) 108375605
chr19 5624101 5624541 TCF7L2 ENCODE Uniform TFBS no Pancreas (Panc1) 108375606
chr19 5624127 5624957 ZNF274 GTRD no Liver (HepG2) 108375607
chr19 5624136 5624532 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108375608
chr19 5624138 5624544 ZNF143 GTRD no Epithelial (MCF-7) 108375609
chr19 5624175 5624841 ZNF274 GTRD no Bone Marrow (K562) 108375610
chr19 5624210 5624506 POL24H8 ENCODE Uniform TFBS no Brain (SK-N-MC) 108375612
Genes associated with rs188352201[chr19:5624482], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More