EnhancerDB
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  3. rs188498399[chr19:1189060]
Enhancers that have rs188498399[chr19:1189060]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 1187565 1198948 enh17840
Bone Marrow (K562) Blood (T-cell) Bone (Osteoblast) Placenta Colon (HCT116) Thymus
Transcript factors that have rs188498399[chr19:1189060]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 1188556 1190366 TCF7L2 GTRD no Colon (HCT116) 21831721
chr19 1188556 1190366 TCF7L2 GTRD no Colon (HCT116) 108351081
chr19 1188634 1189929 ZNF274 GTRD no Bone Marrow (K562) 21831722
chr19 1188634 1189929 ZNF274 GTRD no Bone Marrow (K562) 108351082
chr19 1188788 1190526 TCF7L2 GTRD no Colon (HCT116) 21831723
chr19 1188788 1190526 TCF7L2 GTRD no Colon (HCT116) 108351083
chr19 1188856 1189701 ZNF274 GTRD no Cervix (HeLa-S3) 108351084
chr19 1188861 1190308 TCF7L2 GTRD no Colon (HCT116) 21831724
chr19 1188861 1190308 TCF7L2 GTRD no Colon (HCT116) 108351085
chr19 1188872 1189792 ZNF143 GTRD no Epithelial (MCF-7) 108351086
chr19 1188985 1189907 ZNF274 GTRD no Bone Marrow (K562) 21831725
chr19 1188985 1189907 ZNF274 GTRD no Bone Marrow (K562) 108351087
chr19 1189009 1189878 ZNF274 GTRD no Cervix (HeLa-S3) 108351088
chr19 1189027 1189833 ZNF274 GTRD no Blood (GM12878) 108351089
chr19 1189028 1189971 ZNF274 GTRD no Liver (HepG2) 108351090
chr19 1189045 1190130 ZNF274 GTRD no Cervix (HeLa-S3) 108351091
chr19 1189047 1189064 RARA JASPAR yes 111999950
chr19 1189047 1189064 RXRA JASPAR yes 111999951
chr19 1189047 1189885 ZNF274 GTRD no Bone Marrow (K562) 21831726
chr19 1189047 1189885 ZNF274 GTRD no Bone Marrow (K562) 108351092
Genes associated with rs188498399[chr19:1189060], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More