EnhancerDB
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  3. rs1889976[chr1:185236512]
Enhancers that have rs1889976[chr1:185236512]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 185234545 185238695 enh111542
Brain (SK-N-MC)
Transcript factors that have rs1889976[chr1:185236512]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 185236507 185236515 GMEB2 JASPAR yes 33795992
chr1 185236510 185236520 ALX3 JASPAR yes 33795993
chr1 185236510 185236520 GSX1 JASPAR yes 33795994
chr1 185236510 185236520 GSX2 JASPAR yes 33795995
chr1 185236510 185236520 HOXB2 JASPAR yes 33795996
chr1 185236510 185236520 HOXB3 JASPAR yes 33795997
chr1 185236510 185236520 MEOX1 JASPAR yes 33795998
chr1 185236510 185236520 MEOX2 JASPAR yes 33795999
chr1 185236510 185236520 MIXL1 JASPAR yes 33796000
chr1 185236510 185236521 HOXA10 JASPAR yes 33796001
chr1 185236511 185236519 LMX1A JASPAR yes 33796002
chr1 185236511 185236519 LMX1B JASPAR yes 33796003
chr1 185236511 185236519 NKX6-1 JASPAR yes 33796004
chr1 185236511 185236519 NKX6-2 JASPAR yes 33796005
chr1 185236511 185236519 PDX1 JASPAR yes 33796006
chr1 185236511 185236519 VAX1 JASPAR yes 33796007
chr1 185236511 185236519 VAX2 JASPAR yes 33796008
chr1 185236511 185236519 VSX1 JASPAR yes 33796009
chr1 185236511 185236524 DUXA JASPAR yes 33796010
chr1 185236512 185236523 PHOX2A JASPAR yes 33796011
chr1 185236512 185236523 PROP1 JASPAR yes 33796012
Genes associated with rs1889976[chr1:185236512], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More