EnhancerDB
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  3. rs189540184[chr19:6581105]
Enhancers that have rs189540184[chr19:6581105]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 6566085 6582575 enh4988
Bone Marrow (K562) Cervix (HeLa-S3) Esophagus Blood (OCI-LY7) Muscle (A673) Colon (HCT116) Peripheral Blood (MM.1S) Blood (Karpas-422) Lung (PC-9) Spleen Blood (T-cell)
Transcript factors that have rs189540184[chr19:6581105]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 6575988 6581396 ZNF274 GTRD no Blood (GM12878) 108378571
chr19 6575988 6581396 ZNF274 GTRD no Blood (GM12878) 108378572
chr19 6579381 6581351 ZNF274 GTRD no Blood (GM12878) 108378735
chr19 6579409 6581234 ZNF274 GTRD no Blood (GM12878) 108378739
chr19 6579856 6581211 TCF7L2 GTRD no Colon (HCT116) 21845878
chr19 6579856 6581211 TCF7L2 GTRD no Colon (HCT116) 108378752
chr19 6579877 6581289 TCF7L2 GTRD no Colon (HCT116) 21845880
chr19 6579877 6581289 TCF7L2 GTRD no Colon (HCT116) 108378754
chr19 6580030 6581163 TCF7L2 GTRD no Colon (HCT116) 21845881
chr19 6581090 6581111 IRF1 JASPAR yes 112278367
chr19 6581092 6581113 IRF1 JASPAR yes 112278368
chr19 6581096 6581117 IRF1 JASPAR yes 112278369
chr19 6581098 6581113 PRDM1 JASPAR yes 112278370
chr19 6581098 6581113 STAT2 JASPAR yes 112278371
chr19 6581099 6581113 SPIC JASPAR yes 112278372
chr19 6581099 6581113 STAT1 JASPAR yes 112278373
chr19 6581101 6581116 FOXP1 JASPAR yes 112278374
chr19 6581105 6581120 FOXP1 JASPAR yes 112278375
Genes associated with rs189540184[chr19:6581105], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More