EnhancerDB
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  3. rs189548730[chr1:46526544]
Enhancers that have rs189548730[chr1:46526544]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 46526385 46530875 enh49731
Peripheral Blood (MM.1S) Large Intestine
Transcript factors that have rs189548730[chr1:46526544]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 46526384 46528746 TCF7L2 GTRD no Colon (HCT116) 107803083
chr1 46526539 46526550 HOXA10 JASPAR yes 28639503
chr1 46526540 46526550 EMX1 JASPAR yes 28639504
chr1 46526540 46526550 EMX2 JASPAR yes 28639505
chr1 46526540 46526550 GBX2 JASPAR yes 28639506
chr1 46526540 46526550 GSX1 JASPAR yes 28639507
chr1 46526540 46526550 GSX2 JASPAR yes 28639508
chr1 46526540 46526550 HOXB2 JASPAR yes 28639509
chr1 46526540 46526550 HOXB3 JASPAR yes 28639510
chr1 46526540 46526550 LHX6 JASPAR yes 28639511
chr1 46526540 46526550 MEOX1 JASPAR yes 28639512
chr1 46526540 46526550 MEOX2 JASPAR yes 28639513
chr1 46526540 46526550 MNX1 JASPAR yes 28639514
chr1 46526540 46526550 POU6F1 JASPAR yes 28639515
chr1 46526540 46526550 RAX JASPAR yes 28639516
chr1 46526541 46526549 LMX1A JASPAR yes 28639517
chr1 46526541 46526549 LMX1B JASPAR yes 28639518
chr1 46526541 46526549 NKX6-1 JASPAR yes 28639519
chr1 46526541 46526549 NKX6-2 JASPAR yes 28639520
chr1 46526541 46526549 PDX1 JASPAR yes 28639521
chr1 46526541 46526549 VAX1 JASPAR yes 28639522
chr1 46526541 46526549 VAX2 JASPAR yes 28639523
chr1 46526541 46526549 VSX1 JASPAR yes 28639524
Genes associated with rs189548730[chr1:46526544], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More