EnhancerDB
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  3. rs189990558[chr1:20093410]
Enhancers that have rs189990558[chr1:20093410]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 20081105 20095655 enh26567
Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Astrocyte Bone (Osteoblast) Muscle (A673) Colon (HCT116) Peripheral Blood (MM.1S) Lung (PC-9) Muscle (Myotube)
Transcript factors that have rs189990558[chr1:20093410]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 20093404 20093419 LEF1 JASPAR yes 27216339
chr1 20093404 20093419 NR2C2 JASPAR yes 27216340
chr1 20093405 20093419 TCF7L2 JASPAR yes 27216341
Genes associated with rs189990558[chr1:20093410], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More