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- rs190539537[chr12:57764411]
Enhancers that have rs190539537[chr12:57764411]
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| Chrom. |
Start |
End |
Enhancer ID |
Tissues that enhancer appears |
More |
| chr12 |
57759005 |
57768375 |
enh2394 |
|
|
Transcript factors that have rs190539537[chr12:57764411]
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| Chrom. |
Start |
End |
TF name |
Source |
Predicted site? |
Tissue |
id |
More |
|
chr12
|
57763746
|
57768350
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
108040414
|
|
|
chr12
|
57763887
|
57767822
|
ZBTB33
|
GTRD
|
no
|
Lung (A549)
|
108040415
|
|
|
chr12
|
57764045
|
57767203
|
ZBTB33
|
GTRD
|
no
|
Lung (A549)
|
108040416
|
|
|
chr12
|
57764105
|
57767563
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
108040417
|
|
|
chr12
|
57764117
|
57767352
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
108040418
|
|
|
chr12
|
57764117
|
57767407
|
ZBTB33
|
GTRD
|
no
|
Lung (A549)
|
108040419
|
|
|
chr12
|
57764133
|
57767192
|
ZNF274
|
GTRD
|
no
|
Blood (GM12878)
|
108040420
|
|
|
chr12
|
57764142
|
57766387
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
108040421
|
|
|
chr12
|
57764159
|
57767647
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
108040422
|
|
|
chr12
|
57764166
|
57767369
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
108040423
|
|
|
chr12
|
57764182
|
57766389
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
108040424
|
|
|
chr12
|
57764194
|
57767658
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
108040425
|
|
|
chr12
|
57764232
|
57766349
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
108040426
|
|
|
chr12
|
57764260
|
57767550
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
108040427
|
|
|
chr12
|
57764270
|
57766362
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
108040428
|
|
|
chr12
|
57764282
|
57766436
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
108040429
|
|
|
chr12
|
57764285
|
57767436
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
108040430
|
|
|
chr12
|
57764285
|
57767636
|
ZNF274
|
GTRD
|
no
|
Blood (GM12878)
|
108040431
|
|
|
chr12
|
57764289
|
57765848
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
108040432
|
|
|
chr12
|
57764300
|
57767217
|
ZBTB33
|
GTRD
|
no
|
Lung (A549)
|
108040433
|
|
|
chr12
|
57764309
|
57766431
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
108040434
|
|
|
chr12
|
57764312
|
57767245
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
108040435
|
|
|
chr12
|
57764313
|
57767449
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
108040436
|
|
|
chr12
|
57764330
|
57765333
|
ZNF274
|
GTRD
|
no
|
Blood (GM12878)
|
108040437
|
|
|
chr12
|
57764332
|
57764567
|
ZNF274
|
GTRD
|
no
|
Bone Marrow (K562)
|
108040438
|
|
|
chr12
|
57764370
|
57765842
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
108040439
|
|
|
chr12
|
57764388
|
57767834
|
ZBTB33
|
GTRD
|
no
|
Lung (A549)
|
108040440
|
|
|
chr12
|
57764399
|
57764420
|
IRF1
|
JASPAR
|
yes
|
|
121130868
|
|
|
chr12
|
57764401
|
57764416
|
IRF9
|
JASPAR
|
yes
|
|
121130869
|
|
|
chr12
|
57764408
|
57765889
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
108040441
|
|
Genes associated with rs190539537[chr12:57764411], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
| Chrom. |
Start |
End |
Strand |
Gene name |
Ensembl ID |
TSS of gene |
Distance between TSS and SNP |
Tissue |
q Value |
id |
More |
|
chr12
|
58131796
|
58143994
|
+
|
TSPAN31
|
ENSG00000135452.5
|
58131796
|
367385
|
Heart
|
0.328241
|
12263
|
|