EnhancerDB
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  3. rs190620199[chr6:36635655]
Enhancers that have rs190620199[chr6:36635655]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 36614945 36639164 enh9086
Astrocyte Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs190620199[chr6:36635655]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 36635644 36635657 TFAP2A JASPAR yes 101356845
chr6 36635644 36635657 TFAP2B JASPAR yes 101356846
chr6 36635644 36635657 TFAP2C JASPAR yes 101356847
chr6 36635644 36635659 TFAP2C JASPAR yes 101356848
chr6 36635644 36635663 CTCF JASPAR yes 101356849
chr6 36635645 36635656 EBF1 JASPAR yes 101356850
chr6 36635645 36635660 ZIC3 JASPAR yes 101356851
chr6 36635650 36635660 MZF1 JASPAR yes 101356852
Genes associated with rs190620199[chr6:36635655], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More