-
Home
- SNP
- rs190808260[chr1:233702798]
Enhancers that have rs190808260[chr1:233702798]
Back to top
| Chrom. |
Start |
End |
Enhancer ID |
Tissues that enhancer appears |
More |
| chr1 |
233702725 |
233703081 |
vista5574 |
|
|
Transcript factors that have rs190808260[chr1:233702798]
Back to top
| Chrom. |
Start |
End |
TF name |
Source |
Predicted site? |
Tissue |
id |
More |
|
chr1
|
233702568
|
233703470
|
AR
|
GTRD
|
no
|
Prostate (PC-3)
|
107879562
|
|
|
chr1
|
233702572
|
233704439
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
107879563
|
|
|
chr1
|
233702587
|
233702924
|
ZNF274
|
GTRD
|
no
|
Liver (HepG2)
|
107879564
|
|
|
chr1
|
233702695
|
233704563
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
107879565
|
|
|
chr1
|
233702698
|
233702988
|
ZNF274
|
GTRD
|
no
|
Liver (HepG2)
|
107879566
|
|
|
chr1
|
233702734
|
233704338
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
107879567
|
|
|
chr1
|
233702739
|
233704280
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
107879568
|
|
|
chr1
|
233702780
|
233702984
|
ZNF274
|
ENCODE Uniform TFBS
|
no
|
Bone Marrow (K562)
|
107879569
|
|
|
chr1
|
233702791
|
233702806
|
STAT1
|
JASPAR
|
yes
|
|
118481615
|
|
|
chr1
|
233702793
|
233702804
|
STAT1
|
JASPAR
|
yes
|
|
118481616
|
|
|
chr1
|
233702793
|
233702804
|
STAT3
|
JASPAR
|
yes
|
|
118481617
|
|
|
chr1
|
233702796
|
233703372
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
107879570
|
|
|
chr1
|
233702798
|
233703271
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
107879571
|
|
Genes associated with rs190808260[chr1:233702798], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
| Chrom. |
Start |
End |
Strand |
Gene name |
Ensembl ID |
TSS of gene |
Distance between TSS and SNP |
Tissue |
q Value |
id |
More |