EnhancerDB
  1. Home
  2. SNP
  3. rs193180116[chr1:28854072]
Enhancers that have rs193180116[chr1:28854072]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 28831005 28856175 enh187
Bone Marrow (K562) Prostate (PC-3) Liver (HepG2) Prostate (RWPE1) Esophagus Blood (OCI-LY7) Muscle (A673) Placenta Colon (HCT116) Peripheral Blood (MM.1S) Blood (Karpas-422) Lung (PC-9) Pancreas Epithelial (MCF-7)
Transcript factors that have rs193180116[chr1:28854072]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 28854059 28854073 ONECUT1 JASPAR yes 27776222
chr1 28854059 28854073 ONECUT2 JASPAR yes 27776223
chr1 28854059 28854073 ONECUT3 JASPAR yes 27776224
chr1 28854062 28854072 PAX3 JASPAR yes 27776225
chr1 28854062 28854072 PAX7 JASPAR yes 27776226
chr1 28854064 28854074 GSX2 JASPAR yes 27776227
chr1 28854064 28854074 LBX2 JASPAR yes 27776228
chr1 28854064 28854074 MIXL1 JASPAR yes 27776229
chr1 28854064 28854074 MNX1 JASPAR yes 27776230
chr1 28854064 28854074 RAX JASPAR yes 27776231
chr1 28854065 28854073 ISX JASPAR yes 27776232
chr1 28854065 28854073 LHX9 JASPAR yes 27776233
chr1 28854065 28854073 LMX1B JASPAR yes 27776234
chr1 28854065 28854073 PRRX1 JASPAR yes 27776235
chr1 28854065 28854073 RAX2 JASPAR yes 27776236
chr1 28854065 28854073 SHOX JASPAR yes 27776237
chr1 28854065 28854073 UNCX JASPAR yes 27776238
chr1 28854071 28854092 IRF1 JASPAR yes 27776239
chr1 28854072 28854087 FOXP1 JASPAR yes 27776240
Genes associated with rs193180116[chr1:28854072], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More