EnhancerDB
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  3. rs193197538[chr1:220566012]
Enhancers that have rs193197538[chr1:220566012]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 220562845 220566995 enh95977
Epithelial (MCF-7)
Transcript factors that have rs193197538[chr1:220566012]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 220565420 220566302 ZNF143 GTRD no Epithelial (MCF-7) 21381723
chr1 220565432 220566257 ZNF143 GTRD no Epithelial (MCF-7) 21381724
chr1 220565476 220566251 ZNF143 GTRD no Epithelial (MCF-7) 21381725
chr1 220565495 220566141 ZNF143 GTRD no Epithelial (MCF-7) 21381726
chr1 220565517 220566170 ZNF143 GTRD no Epithelial (MCF-7) 21381727
chr1 220565539 220566040 ZNF143 GTRD no Epithelial (MCF-7) 21381728
chr1 220565582 220566111 ZNF143 GTRD no Epithelial (MCF-7) 21381730
chr1 220565597 220566103 ZNF143 GTRD no Epithelial (MCF-7) 21381731
chr1 220565616 220566093 ZNF143 GTRD no Epithelial (MCF-7) 21381732
chr1 220565630 220566016 ZNF143 GTRD no Epithelial (MCF-7) 21381733
chr1 220565688 220566117 ZNF143 GTRD no Epithelial (MCF-7) 21381734
chr1 220565707 220566064 ZNF143 GTRD no Epithelial (MCF-7) 21381735
chr1 220566008 220566021 NFKB1 JASPAR yes 35492233
chr1 220566008 220566021 NFKB2 JASPAR yes 35492234
chr1 220566011 220566022 CEBPB JASPAR yes 35492235
Genes associated with rs193197538[chr1:220566012], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More