EnhancerDB
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Enhancers that have rs1987873[chr1:173978135]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 173964985 173980375 enh738
Brain (SK-N-SH) Astrocyte Bone (Osteoblast) Blood (OCI-LY7) Muscle (A673) Colon (HCT116) Blood (Karpas-422) Lung (PC-9) Muscle (Myoblast) Muscle (Myotube)
Transcript factors that have rs1987873[chr1:173978135]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 173978114 173978135 IRF1 JASPAR yes 33213304
chr1 173978115 173978136 IRF1 JASPAR yes 33213306
chr1 173978116 173978137 IRF1 JASPAR yes 33213308
chr1 173978117 173978138 IRF1 JASPAR yes 33213310
chr1 173978118 173978139 IRF1 JASPAR yes 33213312
chr1 173978119 173978140 IRF1 JASPAR yes 33213314
chr1 173978120 173978135 FOXP1 JASPAR yes 33213315
chr1 173978120 173978141 IRF1 JASPAR yes 33213316
chr1 173978121 173978136 FOXP1 JASPAR yes 33213317
chr1 173978121 173978142 IRF1 JASPAR yes 33213318
chr1 173978122 173978137 FOXP1 JASPAR yes 33213319
chr1 173978124 173978139 FOXP1 JASPAR yes 33213320
chr1 173978125 173978140 STAT2 JASPAR yes 33213321
Genes associated with rs1987873[chr1:173978135], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More