EnhancerDB
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  3. rs199527933[chr19:5169238]
Enhancers that have rs199527933[chr19:5169238]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 5162945 5179095 enh17878
Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Astrocyte Bone (Osteoblast) Placenta Colon (HCT116) Lung (PC-9) Pancreas
Transcript factors that have rs199527933[chr19:5169238]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 5169217 5169238 IRF1 JASPAR yes 112220107
chr19 5169218 5169239 IRF1 JASPAR yes 112220109
chr19 5169219 5169240 IRF1 JASPAR yes 112220111
chr19 5169220 5169241 IRF1 JASPAR yes 112220113
chr19 5169221 5169242 IRF1 JASPAR yes 112220115
chr19 5169222 5169243 IRF1 JASPAR yes 112220117
chr19 5169223 5169238 FOXP1 JASPAR yes 112220118
chr19 5169223 5169244 IRF1 JASPAR yes 112220119
chr19 5169224 5169239 FOXP1 JASPAR yes 112220120
chr19 5169224 5169245 IRF1 JASPAR yes 112220121
chr19 5169225 5169240 FOXP1 JASPAR yes 112220122
chr19 5169226 5169247 IRF1 JASPAR yes 112220123
chr19 5169227 5169242 FOXP1 JASPAR yes 112220124
chr19 5169228 5169243 STAT2 JASPAR yes 112220125
chr19 5169228 5169249 IRF1 JASPAR yes 112220126
chr19 5169229 5169244 FOXP1 JASPAR yes 112220127
chr19 5169230 5169251 IRF1 JASPAR yes 112220128
chr19 5169234 5169249 PRDM1 JASPAR yes 112220129
chr19 5169234 5169255 IRF1 JASPAR yes 112220130
chr19 5169235 5169256 ZNF263 JASPAR yes 112220131
chr19 5169236 5169257 IRF1 JASPAR yes 112220132
chr19 5169237 5169258 ZNF263 JASPAR yes 112220133
chr19 5169238 5169253 PRDM1 JASPAR yes 112220134
chr19 5169238 5169259 IRF1 JASPAR yes 112220135
Genes associated with rs199527933[chr19:5169238], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More