EnhancerDB
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  3. rs199802539[chr6:37069353]
Enhancers that have rs199802539[chr6:37069353]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 37057385 37075268 enh23200
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-SH) Large Intestine Blood (T-cell) Blood (OCI-LY7) Placenta Colon (HCT116) Uterus Peripheral Blood (MM.1S) Embryonic Stem Cell Line (H1-hESC) Lung (PC-9) Pancreas Pancreas (Panc1) Neural Stem Cells (H9) Thymus Epithelial (MCF-7)
Transcript factors that have rs199802539[chr6:37069353]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 37069340 37069361 IRF1 JASPAR yes 101385848
chr6 37069343 37069364 IRF1 JASPAR yes 101385849
chr6 37069344 37069365 IRF1 JASPAR yes 101385850
chr6 37069345 37069366 IRF1 JASPAR yes 101385851
chr6 37069346 37069361 FOXP1 JASPAR yes 101385852
chr6 37069346 37069367 IRF1 JASPAR yes 101385853
chr6 37069347 37069368 IRF1 JASPAR yes 101385854
chr6 37069348 37069363 FOXP1 JASPAR yes 101385855
chr6 37069348 37069369 IRF1 JASPAR yes 101385856
chr6 37069349 37069364 FOXP1 JASPAR yes 101385857
chr6 37069349 37069370 IRF1 JASPAR yes 101385858
chr6 37069350 37069365 FOXP1 JASPAR yes 101385859
chr6 37069351 37069366 FOXP1 JASPAR yes 101385860
chr6 37069352 37069367 FOXP1 JASPAR yes 101385861
chr6 37069353 37069368 FOXP1 JASPAR yes 101385862
chr6 37069353 37069374 IRF1 JASPAR yes 101385863
Genes associated with rs199802539[chr6:37069353], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More