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- rs199827975[chr19:460292]
Enhancers that have rs199827975[chr19:460292]
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| Chrom. |
Start |
End |
Enhancer ID |
Tissues that enhancer appears |
More |
Transcript factors that have rs199827975[chr19:460292]
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| Chrom. |
Start |
End |
TF name |
Source |
Predicted site? |
Tissue |
id |
More |
|
chr19
|
459410
|
462486
|
ZNF274
|
GTRD
|
no
|
Bone Marrow (K562)
|
108343761
|
|
|
chr19
|
459431
|
462639
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
108343762
|
|
|
chr19
|
459554
|
462770
|
ZNF274
|
GTRD
|
no
|
Bone Marrow (K562)
|
108343763
|
|
|
chr19
|
459590
|
462570
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
108343764
|
|
|
chr19
|
459642
|
462682
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
108343765
|
|
|
chr19
|
459642
|
462807
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
108343766
|
|
|
chr19
|
459656
|
462658
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
108343767
|
|
|
chr19
|
459683
|
462703
|
ZNF274
|
GTRD
|
no
|
Liver (HepG2)
|
108343768
|
|
|
chr19
|
459838
|
462603
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
108343769
|
|
|
chr19
|
460026
|
462291
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
108343770
|
|
Genes associated with rs199827975[chr19:460292], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
| Chrom. |
Start |
End |
Strand |
Gene name |
Ensembl ID |
TSS of gene |
Distance between TSS and SNP |
Tissue |
q Value |
id |
More |
|
chr19
|
416583
|
460996
|
-
|
SHC2
|
ENSG00000129946.6
|
460996
|
0
|
Esophagus
|
1.67849e-18
|
16701
|
|
|
chr19
|
416583
|
460996
|
-
|
SHC2
|
ENSG00000129946.6
|
460996
|
0
|
Spleen
|
2.29553e-06
|
16701
|
|