EnhancerDB
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Enhancers that have rs200060841[chr16:859004]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 858833 859023 vista21526
VISTA
Transcript factors that have rs200060841[chr16:859004]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 858265 859658 TCF7L2 GTRD no Colon (HCT116) 108170961
chr16 858447 859990 TCF7L2 GTRD no Colon (HCT116) 108170962
chr16 858621 860086 TCF7L2 GTRD no Colon (HCT116) 108170963
chr16 858684 859971 TCF7L2 GTRD no Colon (HCT116) 108170964
chr16 858765 859355 TCF7L2 GTRD no Colon (HCT116) 108170965
chr16 858813 859740 TCF7L2 GTRD no Colon (HCT116) 108170966
chr16 858836 859287 ZNF143 GTRD no Epithelial (MCF-7) 108170967
chr16 858936 859133 ZNF274 GTRD no Blood (GM12878) 108170968
chr16 858974 859192 ZNF274 GTRD no Liver (HepG2) 108170969
chr16 858987 860026 TCF7L2 GTRD no Colon (HCT116) 108170970
chr16 858995 859006 E2F6 JASPAR yes 49325531
chr16 858996 859017 IRF1 JASPAR yes 49325532
chr16 858998 859019 IRF1 JASPAR yes 49325533
chr16 858999 859020 IRF1 JASPAR yes 49325534
chr16 859000 859021 IRF1 JASPAR yes 49325535
chr16 859001 859016 FOXP1 JASPAR yes 49325536
chr16 859001 859022 IRF1 JASPAR yes 49325537
chr16 859003 859018 FOXP1 JASPAR yes 49325538
chr16 859004 859019 FOXP1 JASPAR yes 49325539
Genes associated with rs200060841[chr16:859004], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More