EnhancerDB
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  3. rs200123788[chr1:28855551]
Enhancers that have rs200123788[chr1:28855551]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 28831005 28856175 enh187
Bone Marrow (K562) Prostate (PC-3) Liver (HepG2) Prostate (RWPE1) Esophagus Blood (OCI-LY7) Muscle (A673) Placenta Colon (HCT116) Peripheral Blood (MM.1S) Blood (Karpas-422) Lung (PC-9) Pancreas Epithelial (MCF-7)
Transcript factors that have rs200123788[chr1:28855551]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 28855543 28855564 IRF1 JASPAR yes 27776453
chr1 28855544 28855559 FOXP1 JASPAR yes 27776454
chr1 28855544 28855565 IRF1 JASPAR yes 27776455
chr1 28855545 28855566 IRF1 JASPAR yes 27776456
chr1 28855547 28855551 YY1 TRANSFAC yes 27776457
chr1 28855548 28855563 FOXP1 JASPAR yes 27776458
chr1 28855549 28855564 FOXP1 JASPAR yes 27776459
chr1 28855550 28855565 FOXP1 JASPAR yes 27776460
chr1 28855550 28855570 RREB1 JASPAR yes 27776461
chr1 28855551 28855566 FOXP1 JASPAR yes 27776462
chr1 28855551 28855571 RREB1 JASPAR yes 27776463
Genes associated with rs200123788[chr1:28855551], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More