EnhancerDB
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  3. rs200330388[chr6:37542277]
Enhancers that have rs200330388[chr6:37542277]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 37541004 37552392 enh38962
Bone Marrow (K562) Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-SH) Esophagus Astrocyte Lung (A549) Colon (HCT116) Lung (PC-9) Muscle (Myoblast) Pancreas (Panc1)
Transcript factors that have rs200330388[chr6:37542277]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 37542262 37542277 MAFK JASPAR yes 101420319
chr6 37542269 37542279 POU6F2 JASPAR yes 101420320
chr6 37542270 37542280 ALX3 JASPAR yes 101420321
chr6 37542270 37542280 EMX1 JASPAR yes 101420322
chr6 37542270 37542280 EMX2 JASPAR yes 101420323
chr6 37542270 37542280 ESX1 JASPAR yes 101420324
chr6 37542270 37542280 GBX2 JASPAR yes 101420325
chr6 37542270 37542280 GSX1 JASPAR yes 101420326
chr6 37542270 37542280 GSX2 JASPAR yes 101420327
chr6 37542270 37542280 HESX1 JASPAR yes 101420328
chr6 37542270 37542280 HOXB2 JASPAR yes 101420329
chr6 37542270 37542280 HOXB3 JASPAR yes 101420330
chr6 37542270 37542280 LBX2 JASPAR yes 101420331
chr6 37542270 37542280 LHX2 JASPAR yes 101420332
chr6 37542270 37542280 LHX6 JASPAR yes 101420333
chr6 37542270 37542280 MEOX1 JASPAR yes 101420334
chr6 37542270 37542280 MEOX2 JASPAR yes 101420335
chr6 37542270 37542280 MIXL1 JASPAR yes 101420336
chr6 37542270 37542280 MNX1 JASPAR yes 101420337
chr6 37542270 37542280 NOTO JASPAR yes 101420338
chr6 37542270 37542280 RAX JASPAR yes 101420339
chr6 37542270 37542281 HOXA10 JASPAR yes 101420340
chr6 37542271 37542279 BSX JASPAR yes 101420341
chr6 37542271 37542279 DLX6 JASPAR yes 101420342
chr6 37542271 37542279 EN1 JASPAR yes 101420343
chr6 37542271 37542279 ISX JASPAR yes 101420344
chr6 37542271 37542279 LBX1 JASPAR yes 101420345
chr6 37542271 37542279 LHX9 JASPAR yes 101420346
chr6 37542271 37542279 LMX1A JASPAR yes 101420347
chr6 37542271 37542279 LMX1B JASPAR yes 101420348
chr6 37542271 37542279 NKX6-1 JASPAR yes 101420349
chr6 37542271 37542279 NKX6-2 JASPAR yes 101420350
chr6 37542271 37542279 PAX4 JASPAR yes 101420351
chr6 37542271 37542279 PDX1 JASPAR yes 101420352
chr6 37542271 37542279 PRRX1 JASPAR yes 101420353
chr6 37542271 37542279 RAX2 JASPAR yes 101420354
chr6 37542271 37542279 SHOX JASPAR yes 101420355
chr6 37542271 37542279 UNCX JASPAR yes 101420356
chr6 37542271 37542279 VAX1 JASPAR yes 101420357
chr6 37542271 37542279 VAX2 JASPAR yes 101420358
chr6 37542271 37542279 VSX1 JASPAR yes 101420359
chr6 37542271 37542279 VSX2 JASPAR yes 101420360
chr6 37542271 37542281 HOXB13 JASPAR yes 101420361
chr6 37542271 37542281 HOXD13 JASPAR yes 101420362
chr6 37542276 37542282 TBP TRANSFAC yes 101420363
Genes associated with rs200330388[chr6:37542277], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More