EnhancerDB
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  3. rs200504459[chr6:29042173]
Enhancers that have rs200504459[chr6:29042173]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 29039505 29043655 enh114170
Brain (SK-N-MC)
Transcript factors that have rs200504459[chr6:29042173]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 29042165 29042176 CDX2 JASPAR yes 100997766
chr6 29042166 29042180 ONECUT2 JASPAR yes 100997767
chr6 29042166 29042180 ONECUT3 JASPAR yes 100997768
chr6 29042167 29042182 FOXA1 JASPAR yes 100997769
chr6 29042168 29042180 FOXI1 JASPAR yes 100997770
chr6 29042168 29042183 FOXP1 JASPAR yes 100997771
chr6 29042169 29042178 SRY JASPAR yes 100997772
chr6 29042169 29042180 FOXP2 JASPAR yes 100997773
chr6 29042169 29042181 FOXC2 JASPAR yes 100997774
chr6 29042169 29042183 FOXF2 JASPAR yes 100997775
chr6 29042170 29042178 FOXG1 JASPAR yes 100997776
chr6 29042170 29042178 FOXO3 JASPAR yes 100997777
chr6 29042170 29042181 FOXB1 JASPAR yes 100997778
chr6 29042170 29042181 FOXC1 JASPAR yes 100997779
chr6 29042170 29042186 POU4F3 JASPAR yes 100997780
chr6 29042171 29042182 FOXA1 JASPAR yes 100997781
chr6 29042171 29042186 FOXA1 JASPAR yes 100997782
chr6 29042172 29042184 FOXI1 JASPAR yes 100997783
chr6 29042172 29042186 POU4F1 JASPAR yes 100997784
chr6 29042172 29042187 FOXP1 JASPAR yes 100997785
chr6 29042172 29042187 HNF1A JASPAR yes 100997786
chr6 29042173 29042185 FOXC2 JASPAR yes 100997787
chr6 29042173 29042187 ONECUT2 JASPAR yes 100997788
chr6 29042173 29042187 ONECUT3 JASPAR yes 100997789
Genes associated with rs200504459[chr6:29042173], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More